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II.9.2 - FGE Calibration

Spring and fall chinook fish guidance efficiencies (FGE) at Snake River Dams and McNary dam were estimated using CRiSP1.5 and Snake River PIT tags data. For fall chinook the results were calibrated with data from 1993 through 1995. For spring chinook the data extended from 1989 through 1995.

The fit involved a stepwise process in which FGE was adjusted sequentially from Lower Granite dam down to McNary dam. In this approach the FGE at a specific dam was dependent on the FGE's of the dams upstream. To test the validity of the FGE estimation the results were compared to FGE measured independently at Lower Granite (LGR), Little Goose (LGO) and McNary (MCN) dams. In this way FGE the was only parameter that was adjusted to fit the observed PIT tag recoveries at the dams. All other parameters were fixed.

Spring Chinook

The FGE's were calibrated with data from fish collected and PIT tagged in the Snake River trap and recovered at LGR, LGS, LMO (1993-1995 only), and MCN dams. Data was used from the years 1990 through 1995. The numbers marked and recaptured are given in Table 42. The data was extracted from the PTAGIS data base. All recoveries were used, which means that in 1993-1995 significant numbers of fish were detected more than once due to slide-gate operations for NMFS survival studies.

The FGE's estimated from the fitting process are given in Table 43 and comparisons to FGE's determined by fyke net and PIT tag studies are given in Table 44. The CRiSP-based estimates are within a standard deviation for the PIT tag derived values for Lower Granite an Little Goose dams and for the fyke net derived value for McNary dam. The fyke net derived value for Lower Granite and Little Goose dams are higher than the CRiSP based estimates. This difference suggests that point-estimated fyke net-based FGE values may not be representative of seasonal passage conditions at upriver dams, due to changing fish condition, smoltification, and other factors.

Results for 1993-1995 are complicated by slide-gate operation at some of the projects; while this was included in modeling FGE, it adds a degree of uncertainty to our estimates. Clearly, FGE at McNary Dam was not 100% in 1994 - although a remarkably large fraction of the release was detected there as compared to other years (27% in 1994; average of other years with slide gates = 16.5%). Similarly, detections at Lower Monumental in 1995 were surprisingly high. Moreover, system operations in 1989 allowed many tagged fish to escape collection at Lower Granite Dam, despite entering the bypass system; this would lead us to underestimate FGE at Lower Granite and to overestimate at downstream projects, since more fish were in the system than should have been (G. Matthews, NMFS Seattle, pers. comm.). We consider these numbers anomalous and recommend using mean values that exclude the outliers (see Table 46).

Note that our estimates are consistent with estimates of FGE and collection efficiencies determined during the NMFS survival studies of 1993-1995 (Table 45)(Iwamoto et al. 1994, Muir et al. 1995, 1996). While collection efficiencies represent minimum estimates of FGE due to loss of smolts via spillway passage, they provide another check on CRiSP calibration.

The fyke net estimates may be high because the experiments were only conducted in early evening and characterize the passage of fish milling in front of the dam prior to sunset. FGE is in part determined from the vertical position of the fish when they enter the dam. Fish near the surface yield high FGE. The fyke net experiments, being conducted in early evening, measured the FGE of the surface oriented fish. Consequently, the estimate of FGE was biased high. By comparison, fish passing dams at other times of the day are postulated to be distributed throughout the water column and so the FGE would be lower. The PIT tag-based FGE represents guidance conditions over a number of days and so they are expected to be a better representation of the average FGE (J. Williams NMFS Seattle personal communication).

The FGE's developed using CRiSP are consistent with the observed passage numbers and the more robust estimates based on PIT tag studies. The suggested FGE means and ranges for uses in modeling passage conditions for the period 1996-1998 are given in Table 46. The range was derived from the range observed in MCN fyke net studies in 1992 which was from 37 to 91 with a mean of 61.

Note in Table 44 that the fyke net FGE estimates are generally greater than the CRiSP-derived estimates. Since this may be from bias in the FGE studies we suggest lowering all fyke net FGE's by some amount. The average CRiSP derived FGE is about 80% of the fyke net-derived estimates from three dams. We therefore suggest lowering the FGE to 80% of the fyke estimates.

Table 42 Snake River Trap PIT tag release and recapture data at dams, extracted from the PIT tag data base.
1989 1990 1991 1992 1993 1994 1995
Release Start Julian Day 83 99 96 98 99 103 90
Release Numbers 6163 2254 3768 1218 4302 3778 5994
Lower Granite Count 2387 960 1607 435 1898 1241 2676
Little Goose Count 1443 345 689 195 1069 623 1819
Lower Monumental Count -- -- -- -- 831 645 1895
McNary Count 724 201 227 126 535 1003 1259

Table 43 FGE required to fit the Snake Trap PIT tag data for 1989 -1995. Asterisks indicate questionable data, not used in calculating mean FGE.
Dam 1989 1990 1991 1992 1993 1994 1995 mean S.D.
Lower Granite 45.1 48.4 50.0 42.3 53.9 42.3 56.0 48.8 5.2
Little Goose 59.5 39.6 49.8 38.4 49.3 36.2 59.9 47.0 8.4
Lower Monumental 2 2 2 52.0 54.1 56.5 89.0* 66.5 19.5
Ice Harbor 34.4 34.4 34.4 34.4 54.0 54.0 54.0 -- --
McNary 85.8* 61.3 59.7 57.7 51.8 100.0* 71.6 57.8 9.0

Table 44 Comparisons of observed and calculated spring chinook FGE. Observed FGE provided by J. Williams NMFS Seattle.
Dam Year Observed Calculated FGE
Method dates FGE
Lower Granite 1993 PIT tag 4/15 - 5/15 49.5 53.9
1989 Fyke nets 4/11 - 4/30 57 48.7
Little Goose 1993 PIT tag 4/15 - 5/15 56 49.3
1993 Fyke nets 5/22 - 5/24 74 49.3
McNary 1992 Fyke nets 4/28 - 5/28 61 57.7
1982+92 Fyke nets 4/28 - 5/28 66 57.7
1989 PIT tag - 631 85.8
1995 PIT tag - 602 71.6
1Stuehrenberg and Johnson (1990)
2Cramer, Willis and Witty (1995)

Table 45 Comparison of modeled FGE at Snake River projects versus FGE (1993) and collection efficiency (1994-95) estimates from NMFS survival studies.
Year Project CRiSP NMFS FGE/collection efficiency
Mean Maximum
1993 LGR 53.9 44.2 n/a
LGS 49.3 50.5 n/a
1994 LGR 42.3 39.7 49.0
LGS 36.2 23.8 40.6
LMN 56.5 35.4 54.8
1995 LGR 56.0 43.3 52.4
LGS 59.9 35.4 40.6
LMN 89.0 44.8 65.3

Table 46 Suggested FGE for spring chinook modeling over the period 1996-1998.
Dam Mean (%) Range (± %)
Lower Granite 45 20
Little Goose 45 20
Lower Monumental 55.3 20
Ice Harbor 57a 20
McNary 52.5 20
John Day 58 10
The Dalles 34 11
Bonneville I 30 7
Bonneville II 54 13
aBased on estimate from coordination process and adjusted downward to account for bias in fyke net studies (provided by D. Askren of BPA)

Fall Chinook FGE

PIT tag data from wild-caught Snake River subyearling chinook were used to estimate actual FGE during 1993 through 1995. Previous years' data suffered from small sample sizes and poor collection rates. The approach is to create a release of fish in CRiSP that has the same properties as the actual tagging groups and then to adjust FGE at Lower Granite, Little Goose, and McNary dams to obtain good agreement in number of fish collected. The data are given in Table 47 and the resulting FGE calibration is given in Table 48 below, along with the NMFS Coordination estimates for mean, low, and high FGE's at the relevant projects. For 1994 a considerable mortality rate must be assumed following tagging given the extremely low rate of recapture; also note that in 1995 slide gate operations resulted in considerable rates of return to the river for PIT-tagged fish during the fall chinook outmigration season. Note that estimates of FGE are close to the specified range of coordination FGE values.

Table 47 Fall chinook PIT tag release and recapture information for 1993-1995
Year Release LGR LGO LMO MCN
1993 1509 251 52 10 5
1994 2776 201 50 50 33
1995 1652 440 238 198 147

Table 48 NMFS and CRiSP estimates of FGE for subyearling chinook at collection facilities.
Dam NMFS coordinated FGE 1993 1994 1995
LGR 35% (20-40%) 35% 35% 32%
LGS 35% (20-40%) 30% 18% 24%
LMN 31% (29-35%) n/a 35% 29%
MCN 47% (10-81%) 40% 65% 42%

Steelhead FGE

A similar approach was taken for juvenile steelhead PIT tagged from the Dworshak hatchery. These fish were detected at Lower Granite, Little Goose, and McNary Dams, and assuming travel time and mortality algorithms were calibrated, estimates of FGE could obtained for these projects. FGE was estimated using data from 1989-1995 inclusive (Table 49). Because of the variation in year-to-year fits, the average of these years' FGE values was used. Note that the PIT tag-calibrated FGE value is close to that estimated by NMFS for coordination purposes, but at McNary, for spring chinook, the calibrated value is about 5/6 that of the coordination value in the System Operation Review. This makes sense in the context of the fyke net argument made above. Also note that 1994 and 1995 observations are complicated by the fact that slide gates were in operation at all three upper projects; this led, for example, to an astonishingly high collection rate at Lower Monumental Dam in 1995.

Table 49 CRiSP estimated FGE for steelhead.
Year LGR LGO LMN MCN
1989 82% 89% n/a 90%
1990 77% 66% n/a 27%
1991 89% 99% n/a 100%
1992 77% 63% n/a 41%
1993 56% 88% n/a 54%
1994 72% 58% 73% 50%
1995 81% 67% 100% 54%
average 76.3% 75.7% 86.5% 59.4%
SOR value 79.0% 79.0% 76.0% 75.0%

Historical FGE Values

Nearly all Federal projects on the Columbia and Snake Rivers have undergone considerable change since their initial construction. Most have added bypass systems or other mechanisms to provide improved juvenile passage; consequently, FGE has improved over time. We have used current estimates of FGE and scaled them for historical patterns of screen addition, gate raises, and other operational changes that alter FGE. Estimated historical FGE values for CRiSP 1.5 for all species are given in Table 50. A comparison of the CRiSP1.5 FGE values to values used in CRiSP1.4 and in the Previous Coordinations are given in Table 51.

Table 50 Historical FGE values for each dam, by stock used for CRiSP1.5. Note FGE in the early years of transportation are adjusted to generate estimated transport numbers for Snake River dams. See Table 72 for relationship of FGE and transport numbers.
Dam Year spring chinook fall chinook steelhead
Bonneville I 1975-1983
1984-1992
1993-1994
16%
30%
30%
15%
10%
15%
17%
65%
65%
Bonneville II 1983-1992
1993-1994
15%
54%
24%
24%
52%
52%
The Dalles 1975- 34% 43% 36%
John Day 1975-1984
1985
1986
1987-1994
2%
33%
44%
58%
2%
16%
20%
26%
2%
41%
55%
72%
McNary 1975-1977
1978
1979
1980
1981
1982-1988
1989
1990
1991
1992
1993
1994
2%
4%
8%
25%
52%
57%
58%
61%
60%
58%
52%
58%
2%
5%
8%
21%
40%
40%
40%
40%
40%
40%
40%
40%
2%
4%
9%
27%
62%
62%
62%
62%
62%
62%
62%
62%
Wells 1991-1994 96% 96% 96%
Ice Harbor 1975-1983
1984-1992
1993
1994
2%
43%
57%
68%
2%
43%
31%
31%
2%
47%
77%
77%
L. Monumental 1975-1991
1992
1993
1994
2%
52%
54%
56%
2%
31%
31%
31%
2%
63%
63%
63%
Little Goose 1971
1972
1973
1974
1975
1976
1977
1978
1979
1980
1981
1982
1983
1984-1988
1989
1990
1991
1992
1993
1994
9%
18%
7%
7%
12%
21%
47%
37%
33%
44%
29%
44%
44%
44%
59%

40%

50%

38%

50%

36%
-
-
-
-
24%

24%

30%

30%

30%

30%

30%

30%

30%

30%

30%

30%

30%

30%

30%

30%
-
-
-
-
38%

38%

56%

56%

56%

56%

56%

56%

56%

56%

81%

81%

81%

81%

81%

81%
Lower Granite 1975
1976

1977

1978

1979

1980

1981

1982

1983-1988

1989

1990

1991

1992

1993

1994
7%
7%

47%

37%

33%

34%

29%

52%

46%

45%

48%

50%

42%

54%

42%
13%
35%

35%

35%

35%

35%

35%

35%

35%

35%

35%

35%

35%

35%

35%
22%
62%

62%

62%

62%

62%

62%

62%

62%

76%

76%

76%

76%

76%

76%

Table 51 Spring chinook historical FGE values for CRiSP1.4, CRiSP.1.5, Previous Coordination for the System Operation Review and Field Observations of FGE.
Year Previous Coordination Max/Avg/Min Field Observ Max/Avg/Min Model values Max/Avg/Min Condition
CRiSP1.4 CRiSP1.5
Lower Granite
2003 90% - 86$ 86$ Surface Collector as FGE enhancer
1998 83/67/59 - 53$ 53$ Extended STS
1991-97 74/56/36 - 66/46/26 66/46/26 Raised gate
1995 56 - 50 56 -
1994 56 - 50 42 -
1993 56 49.5 50 54 Survival study 4/15-5/15
1992 56 - 40 42 -
1991 56 - 46 50 Raised gate
1990 53 - 44 48 -
1989 53 66/57/43 47 45 Fyke Nets 4/11-4/30
1983-1988 71/53/35 - 66/46/26* 46 Fully screened
1982 - 52
1981 - 29
1980 - 34
1979 - 33
1978 - 37
1977 - 47
1976 26/19/12 - 21/15/10* 7 -
1975 26/19/12 - 21/15/10* 7 1 of 3 turbines screened
Little Goose
2003 93% - 86$ 86$ Surface Collector as FGE enhancer
1998 80/77/75 - 53$ 53$ Extended SBS
1991-97 74/70/65 - 67/45/40 67/45/40 Raised gate
1995 70 - 45 60 -
1994 70 - 45 36 -
1993 70 56 49 49 Survival study 4/15-5/15
1993 70 80/74/67 - - Fyke net 5/22-5/24
1992 70 - 39 38 -
1991 70 - 47 50 Raised gate
1990 59 - 38 40 -
1989 59 - 49 59 -
1982-1988 74/59/43 - 64/44/24* 44 Fully screened
1981 - 29
1980 - 44
1979 - 33
1978 - 37
1977 - 47
1976 51/40/29 - 11 21 -
1975 51/40/29 - 41/32/23* 12 2/3 screened
1974 - - - 7 2/3 screened
1973 - - - 7 -
1972 - - - 18 2/3 screened
1971 - - - 9 2/3 screened
Lower Monumental
2003 90% - 86 86 Surface Collector as FGE enhancer
1998 80/67/52 - 64/54/42 64/54/42 Gate raise
1995-1997 71/65/57 - 57/52/46 75/55/35 -
1994 - 76/56/36 -
1993 - 74/54/34 -
1992 - 57/52/46 Bypass, STS, flush gate
1989-91 4/2/0 - 4/2/0 4/2/0 -
1970-91 4/2/0 - 4/2/0 4/2/0 Sluiceway
Ice Harbor
2003 93% - 89 89 Surface Collector as FGE enhancer
1996-98 85/77/73 - 68/62/58 68/62/58 Bypass, STS, raised gate
1993-95 76/68/64 - 61/54/51 61/54/51 STS with sluiceway
1989-92 43 - 34 34 -
1984-92 51/43/40 - 34 34 Sluiceway for fish diversion
1962-83 4/2/0 - 2 2 Sluiceway
McNary
2003 87% - 91% 91% Surface Collector as FGE enhancer
2003 87% - 70$ 70$ No Surface Collector
1998 90/87/78 - 70 70 Gate raise, extended SBS
1981-97 91/70/36 - 73/56/29 73/56/29 -
1995 70 - 52 72 -
1994 70 - 52 58 -
1993 70 - 52 52 -
1992 70 91/61/37 61 58 Fyke nets 4/28-5/28
1991 70 - 57 60 -
1990 70 - 58 61 -
1989 70 - 53 58 -
1982-88 70 - 57 57 -
1981 70 - 73/56/29 73/52/29 Fully screened, flush gate
1980 41/31/15 - 33/25/12* 33/25/12* 6 screens
1979 16/12/5 - 13/8/4* 13/8/4* 2 screens
1978 10/7/3 -- 8/4/2* 8/4/2* 1 screen of 14
1957-77 4/2/0 - 4/2/0* 4/2/0* Sluiceway
John Day
2003 72% - 87$ 87$ Surface Collector as FGE enhancer
2003 72% - 58$ 58$ No Surface Collector
1987-98 78/72/55 - 62/58/44 62/58/44 Standard STS, gate removed, bypass
1986 60/55/41 - 48/44/33 48/44/33 12/16 screens installed
1985 46/41/31 - 37/33/25 37/33/25 9/16 screens installed
1971-84 4/2/0 - 4/2/0 4/2/0 Sluiceway
The Dalles
2003 74% - 88$ 88$ Surface Collector as FGE enhancer
2003 74% - 59$ 59$ No Surface Collector
1998 87/74/56 - 70/59/45 70/59/45 Bypass, gate raise, extended SBS
1960-97 51/43/23 - 41/34/18 41/34/18 Sluiceway as fish passage
Bonneville
2003 37% -- 79$ 79$ Surface Collector as FGE enhancer
2003 37% - 30$ 30$ No Surface Collector
1984-98 46/37/29 - 37/30/23 37/30/23 Flush-stored gates, bypass, STS
1933-83 20/20/20 - 16/16/16 16/16/16 Sluiceway
Bonneville Second
2003 44% - 81$ 81$ Surface Collector as FGE enhancer
2003 44% - 35$ 35$ No Surface Collector
1993-98 54/44/34 - 43/35/27 43/35/27 Streamlined trashracks, turbine intake extensions, lowered SBS
1983-92 51/19/6 - 40/15/4 40/15/4 Flush-stored gates, bypass, STS
* Interpolated FGEs assume a minimum 2% volitional entry

# CRiSP FGEs are reduced by factors of 70% at Little Goose and 80% for all other projects to reflect CRiSP calibration to 1989-93 PIT tag observations and available fyke net FGE estimates. Historical FGEs are interpolated from the calibration or reduced FGE, assuming a minimum FGE of 2% for volitional entry into bypass systems.

$ 2003 FGEs for projects having surface collectors compute FGE = (Surface Collector FGE) + (1 - Surface Collector FGE) * (Bypass Screen FGE) assuming Surface Collector FGE=70%

Time Variable FGE

The calibration of time varying FGE is not available for CRiSP1.5.

Bypass orifice and FGE

Fish guidance goes to zero when the surface elevation drops below the bypass orifice elevation (Fig. 57). This parameter, designated bypass_elevation, is set in the columbia.desc file. If bypass_elevation is missing or commented out (with #) the bypass elevation is set to the pool floor_elevation and bypass will occur for all reservoir elevations. This function applies with or without selection of age dependent fge.

Bypass Elevations

The bypass elevations and forebay elevations in feet above sea level (obtained from the Army Corps of Engineers) are set in the columbia.desc file for each dam where a bypass system exists.

Table 52 Bypass and forebay elevations of dams with bypass systems
Dam Bypass elevation (ft) forebay elevation (ft)
Bon # 1 and 2 65.5 77
The Dalles 149 160
John Day 250.5 269
McNary 330 340
Wells 716 781
Ice Harbor 431.5 440
L. Monumental 531.5 540
Little Goose 628.9 638
Lower Granite 729 738

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