Archive of Additions at Columbia Basin Research
5 December 2006
- Status & Trends Overview
- historical trends of migration performance measures estimated from a
life-cycle model (ROSTER) for hatchery
spring and summer Chinook and steelhead (1996-2004) added
30 November 2006
- Salmon Insider - Columbia Basin Research Newsletter
- Autumn 2006 issue
30 November 2006
- Columbia Basin Performance Measures
- expanded query options and new river condition parameters TDG Highest 12hr and Temperature 7DADM
10 November 2006
- ROSTER River-Ocean Survival and Transportation Effects Routine
- Version 2.0 released
3 November 2006
- PitPro - PIT Tag Processor
- Version 4.7 released
1 September 2006
- Google Earth Interface for CBR Data - CBR configuration file for Google Earth
- provides map based searches of our Status & Trends annual salmon monitoring database
3 August 2006
- Salmon Insider - Columbia Basin Research Newsletter
- Summer 2006 issue
30 June 2006
- CWT Smolt-to-Adult Ratio (SAR) Estimates
- analyses updated for all available years
5 May 2006
- Salmon Insider - Columbia Basin Research Newsletter
- Spring 2006 issue
17 April 2006
- Ten Year Historical Run Timing reports for Adult Passage, PIT Tag Adult Returns, PIT Tag Observations, Smolt Index, and Columbia Basin ESUs datasets.
- new Columbia River DART reports
23 March 2006
- Salmon Insider - Columbia Basin Research Newsletter
- Winter 2006 issue
6 February 2006
- PIT Tag Survival and Travel Time Analysis
- analyses updated
19 October 2005
- Salmon Insider - Columbia Basin Research Newsletter
- Autumn 2005 issue
8 August 2005
- PitPro - PIT Tag Processor
- version 3.0 released
5 August 2005
- Salmon Insider - Columbia Basin Research Newsletter
- Summer 2005 issue
30 June 2005
- CWT Smolt-to-Adult Ratio (SAR) Estimates
- analyses updated for all available years
27 April 2005
- Salmon Insider - Columbia Basin Research Newsletter
- Spring 2005 issue
14 March 2005
- javaDART - Java-based DART Graphics Tool
- official release of version 2.0 applet and application
25 January 2005
- Salmon Insider - Columbia Basin Research Newsletter
- Winter 2005 issue
23 November 2004
- Evaluation of the 2003 Predictions of the Run-Timing of Wild Migrant Yearling Chinook, Subyearling Chinook and Steelhead and Water Quality at Multiple Locations on the Snake and Columbia Rivers using CRiSP/RealTime
- post season analysis by W. Nicholas Beer, Susannah Iltis, Chris Van Holmes, and James J. Anderson
3 November 2004
- Columbia Basin Performance Measures
- Adult PIT Tag query added and graphics upgrade
27 October 2004
- Salmon Insider - Columbia Basin Research Newsletter
- Autumn 2004 issue
5 August 2004
- Evaluation of the 2003 Predictions of Run-size and Passage Distributions of Adult Chinook Salmon returning to the Columbia and Snake Rivers
- post season analysis by W. Nicholas Beer, David Salinger, Susannah Iltis, and James J. Anderson
13 July 2004
- Salmon Insider - Columbia Basin Research Newsletter
- Summer 2004 issue
4 May 2004
- Pacific Northwest Index (PNI)
- annual update with data from 1891 through 2003
15 April 2004
- Mid Columbia Status for Juvenile and Adult Salmon
- web portal for Mid Columbia salmon passage and river conditions
12 April 2004
- Smolt-to-Adult (SAR) Estimates for Coded Wire Tag
- analyses updated for 1995-2002 returns
5 April 2004
- Salmon Insider - Columbia Basin Research Newsletter
- Spring 2004 issue
16 March 2004
- Adult Escapement for the Columbia Basin
- compare NMFS interim target abundances with historical trend data
12 March 2004
- Predicted Fall Chinook Survival and Passage Timing Under BiOp and Alternative Summer Spill Programs Using the Columbia River Salmon Passage Model
- white paper by Chris Van Holmes and James J. Anderson
9 February 2004
- PIT Tag Survival and Travel Time Analysis
- analyses for Sawtooth Trap added
1 February 2004
- Salmon Insider - Columbia Basin Research Newsletter
- Winter 2004 issue
28 January 2004
- The Flow Survival Relationship and Flow Augmentation Policy in the Columbia River Basin
- white paper by James J. Anderson
- Sensitivity of salmon survival to temperature in the mainstem Snake and Columbia Rivers
- white paper by W. Nicholas Beer and James J. Anderson
- Decoding 3-D movement patterns of fish in response to hydrodynamics and water quality for forecast simulation
- paper by R. Andrew Goodwin, James J. Anderson, and John M. Nestler submitted to the 6th International Conference on Hydroinformatics 2004, 21-24 June 2004, Singapore
17 December 2003
- javaDART - Java-based DART Graphics Tool
- version 1.7 released for year 2004
9 December 2003
- Toward a Resolution of the Flow/Survival Debate and the Impacts of Flow Augmentation and Water Withdrawal in the Columbia/Snake River System
- draft white paper by James J. Anderson
- An individual-based fishery model and assessing fishery stability DRAFT
- draft paper by James J. Anderson published in 1999
2 December 2003
- PIT Tag Survival and Travel Time Analysis
- analyses for 2003 added
5 November 2003
- Stress, Growth and Survival of Juvenile Chinook Salmon
- Master of Science Thesis by Molly M. Cobleigh
28 October 2003
- DART Adult PIT Tag Conversion Rate report
- updated to include overwintering
- DART PIT Tag Release and Observation Summary report
- new version of the survival and mean travel time estimates program installed which includes harmonic mean travel time estimates
23 October 2003
- PIT Tag Survival and Travel Time Analysis
- analyses for Rapid River Hatchery and Imnaha Trap added
26 August 2003
- Columbia Basin Performance Measures
- exposures for inseason passage and water forecasts added
5 August 2003
- PIT Tag Survival and Travel Time Analysis
- analysis for Clearwater Trap added
17 July 2003
- Predicted Fall Chinook Survival and Passage Timing Under BiOp and Alternative Summer Spill Programs Using CRiSP
- white paper by Christopher Van Holmes and James J. Anderson
17 July 2003
- Exposure of migrating salmon populations in the Columbia/Snake River basins to environmental factors
- white paper by W. Nicholas Beer, Susannah Iltis, and James J. Anderson
15 July 2003
- Total Dissolved Gas submodel parameter calibration for use with CRiSP
- white paper by W. Nicholas Beer
1 May 2003
- Relationship between antigen concentration and bacterial load in Pacific salmon with bacterial kidney disease
- paper by Owen S. Hamel and James J. Anderson
1 April 2003
- Vitality Model
- vitality-based survival model and parameter fitting code
22 March 2003
- An analysis of smolt survival with implications to flow management
- paper by J. Anderson and C. Van Holmes
5 March 2003
- PIT Tag Survival and Travel Time Analysis
- analysis for Wells and Ringold hatcheries added
- PitPro
- program for reading raw PIT tag data and creating a SURPH input file
19 February 2003
- Pacific Northwest Index (PNI)
- annual update with data from 1891 through 2002
13 February 2003
- USER version 2.4a
- User Specified Estimation Routine for Windows
4 February 2003
- SampleSize
- a suite for four sample size programs for estimating parameters: SingleRelease, PairedRelease, PairedRadio, and TransportInRiverRatio
14 January 2003
- Columbia Basin Performance Measures
- new features added
19 December 2002
- javaDART version 1.6
- new version released
18 December 2002
- Smolt-to-Adult Ratio (SAR) Estimates for Coded Wire Tag
- updated for additional analyzed hatcheries
10 December 2002
- PIT Tag Survival and Travel Time Analysis
- online survival and travel time analysis and plots for Columbia Basin hatchery salmon
6 November 2002
- Comparing methods for inferring site biological condition from a sample of site biota
- Kevin W. Brinck, Master of Science Thesis.
30 October 2002
- Inseason Forecasts of Sockeye Salmon Returns to the Bristol Bay Districts of Alaska
- Saang-Yoon Hyun, Final Ph.D.
10 September 2002
- Adult ESU Mean Travel Time Estimates
- mean travel time estimates for returning ESU adult populations based on PIT Tag detections at adult ladders
6 August 2002
- javaDART version 1.5
- new version released, expands historical year range for Adult Passage data at Bonneville
19 July 2002
- Smolt-to-Adult Ratio (SAR) Estimates for Coded Wire Tag
- online data analysis and plots of SARs for CWT hatchery salmon from Oregon, Washington and Idaho
28 May 2002
- Growth of salmonids: eggs and fry
- new interface and data specification controls
7 May 2002
- Columbia / Snake River Adult Passage Predictions
- Adult total run size prediction graph at Bonneville added
8 April 2002
- Columbia / Snake River Adult Passage Predictions
- 2002 inseason predictions started
13 March 2002
- History of the Flow Survival Relationship and Flow Augmentation Policy in the Columbia River Basin
- working paper by James J. Anderson
12 March 2002
- Columbia Basin Performance Measures
- online data analysis of fish exposure to hydrosystem conditions
13 February 2002
- USER 2.0
- User Specified Estimation Routine for Windows
15 January 2002
- In-stream factors affecting juvenile salmonid migration, DRAFT
- E. Ashley Steel, Final Ph.D. dissertation (1999) available through the University of Washington
- A comparison of methods for measuring visual water clarity, DRAFT
- paper by E. Ashley Steel; in press: Journal of the North American Benthological Society
- Modeling Juvenile Salmon Migration Using a Simple Markov Chain, DRAFT
- paper by Steel, E.A., P. Guttorp, J.J. Anderson and D.C. Caccia; final version in: Journal of Agricultural, Biological & Environmental Statistics
20 December 2001
- Pacific Northwest Index (PNI)
- updated for 2001 data
13 November 2001
- The Dynamics and Effects of Bacterial Kidney Disease in Snake River Spring Chinook Salmon (Oncorhynchus tshawyscha)
- Owen Sprague Hamel, Ph.D. dissertation
23 October 2001
- Columbia Basin Anadromous Hatcheries Information and Locations
- provides general information about hatcheries in the Columbia Basin and their locations
10 October 2001
- Northwestern Regional Temperature Data Analysis
- analyses of temperature data for Northwest regional sites with 50 or more daily mean temperatures
17 September 2001
- Columbia / Snake River Adult Passage Predictions
- upstream migration forecasts for chinook passing Columbia and Snake River dams -- Bonneville to Lower Granite
28 August 2001
- An agent-based event driven foraging model
- paper by James J. Anderson
18 June 2001
- javaDART Java-based DART Graphics Tool
- new release with expanded historic adult and river data for Bonneville, The Dalles, John Day, and McNary dams
12 June 2001
- CRiSP1.6 Theory and Calibration
- manual in html format
7 June 2001
- Modeling the impacts of John Day drawdown on the survival of salmonid stocks
- paper by James J. Anderson, Richard W. Zabel, and Richard A. Hinrichsen
31 May 2001
- Effect of spawning day and temperature on salmon emergence: interpretations of a growth model for Methow River chinook
- paper by W. Nicholas Beer and James J. Anderson published in Can. J. Fish. Aquat. Sci.
19 May 2001
- Testimony of James J. Anderson before the Subcommittee on Water and Power of the U.S. House of Representatives Committee on Resources
- this testimony considers the current science and status of the fish populations of the Columbia River System
17 May 2001
- Inseason Forecasts
- new layout, forecasts have been organized by category, and ESU population passage predictions have been added for mainstem Columbia River
16 May 2001
- Coast Model
- new distribution for Win32 systems and the Coast Model Manual has been updated
11 May 2001
- DART Endangered Species (NMFS ESU) Run Timing Analysis
- includes mean travel time estimates, passage forecasts at McNary, and passage predictions with run timing plot at McNary for each ESU population
5 April 2001
- javaDART Java-based DART Graphics Tool
- new Win32 version with simplified installation process
19 March 2001
- USER 1.0 User Specified Estimation Routine
- flexible software tool that allows investigators to develop statistical models for analyzing tagging and counts data
13 February 2001
- javaDART version 1.1
- new release of javaDART, the java-based DART graphics tool
8 February 2001
- Publications and Papers section
- new layout, several sort options, and expanded information
2 February 2001
- Evaluation of the 2000 Predictions of the Run-Timing of Wild Migrant Yearling Chinook and Water Quality at Multiple Locations on the Snake and Columbia Rivers using CRiSP/RealTime
- postseason analysis by W N Beer, S Iltis, C Van Holmes, and J Anderson
31 January 2001
- Application of the Out-Migrant Survival Simulator (OMSS) using the SWARM modeling environment to study smolt-predator interactions
- paper by W N Beer and J Anderson
8 January 2001
- A vitality based model relating stressors and environmental properties to organism survival - DRAFT
- paper by J Anderson
20 December 2000
- CRiSP.1.6 Theory and Calibration manual
- 1.2M pdf only
13 December 2000
- Effects of flow augmentation on Snake River fall chinook
- paper by J Anderson, R Hinrichsen, and C Van Holmes
- Testimony of James J. Anserson before the Subcommittee on Fisheries, Wildlife & Water of the Senate Committee on Environment and Public Works
- Boise, Idaho, November 20, 2000
12 December 2000
- SURPH Version 2 SURvival under Proportional Hazards
- release of version 2 for downloading, includes new features and capabilities
6 December 2000
- PIT-Tag Release & Observation Summary report with option to generate Survival and Mean Travel Time Estimates
- new feature is now available on the DART web page
16 October 2000
- Heat Budget of Water Flowing through Hells Canyon and the Effect of Flow Augmentation on Snake River Water Temperature
- paper by James Anderson
13 October 2000
- Heat Budget Snake River Temperature Data
- Heat Budget paper companion data file, csv format
6 September 2000
- DART Location Map
- map of data collection locations in the Columbia Basin contained in the DART database
19 July 2000
- Analysis of Fish Response to Flows in the 1991 Pasco Flume Experiments
- 1991 paper by James Anderson, pdf only
- Assessment of the risk of pile driving to juvenile fish
- 1990 paper by James Anderson, pdf only
2 June 2000
- Egg Growth of Pre-emergent Salmon
- tool to grow fish under user determined conditions
1 June 2000
- Testimonies by James J. Anderson to the U.S. House of Representatives and U.S. Senate
- testimonies by James J. Anderson
18 April 2000
- javaDART - Java-based DART Graphics Tool
- release of version 1 (beta) for downloading
14 April 2000
- PATH Spring and Fall Chinook Data Files for CRiSP.1.6 and CRiSP.1.5.5
- specialized distribution of data files for downloading
13 January 2000
- Evaluation of the 1999 Predictions of the Run-Timing of Wild Migrant Yearling Chinook and Water Quality at Multiple Locations on the Snake and Columbia Rivers using CRiSP/RealTime
- postseason analysis paper by CBR staff
10 January 2000
- Official Release of CRiSP Passage v1.6.0
- the official release of CRiSP Passage v1.6.0 is available for downloading
16 December 1999
- Coast Model Executable, Data Files, Documentation and Source Code
- release of Coast Model for downloading
22 July 1999
- Evaluation of the 1998 Predictions of the Run-Timing of Wild Migrant Yearling Chinook and Water Quality at Multiple Locations on the Snake and Columbia Rivers using CRiSP/RealTime
- postseason analysis paper by CBR staff
24 May 1999
- Application of the Out-Migrant Survival Simulator using the SWARM modeling environment to study smolt-predator interactions - DRAFT
- paper by W. Nicholas Beer
- Optimization of Spill for Reduction of Dam and Reservoir Mortality in CRiSP - DRAFT
- paper by Steven Kropp
14 April 1999
- Growth of Snake River chinook salmon
- paper by W. Nicholas Beer
5 April 1999
- 1999 Inseason Forecasts
- 1999 Inseason Forecasts for TDG, Temperature, Passage Bar Graphs, and Smolt Passage now available
1 February 1999
- A Personal In-side Review of PATH
- paper by James Anderson
18 December 1998
- New Graphing Option - X,Y Plot - for Columbia River DART
- plots two River Variables against each other, rather than against time
20 August 1998
- Sport Fishing & Recreation
- provides quick and easy access to sport fishing & recreation information in the Columbia River Basin
8 June 1998
- 1998 Inseason Forecasts
- started 1998 Inseason Forecasts for Subyearling Chinook Smolt Passage
29 April 1998
- Official Release of CRiSP Passage v1.5.5
- the official release of CRiSP Passage v 1.5.5 is available for downloading
15 April 1998
- 1998 Inseason Forecasts
- 1998 Inseason Forecasts for Smolt Passage are now available
3 April 1998
- 1998 Inseason Forecasts
- 1998 Inseason Forecasts for Total Dissolved Gas and Passage Bar Graphs are now available
18 December 1997
- CRiSP Harvest Manual
- updated, now available in both html and pdf
9 December 1997
- Hydroelectric Project Information for Columbia Basin
- updated and reorganized to facilitate information access
27 October 1997
- Migration Bibliography
- updated and expanded 27 October 1997
23 October 1997
- Search Columbia Basin Research Web Site
- searchable index of HTML documents on our web site
21 October 1997
- Design and Analysis of Salmonid Tagging Studies in the Columbia Basin, Volume VII: Monte-Carlo Comparison of Confidence Interval Procedures for Estimating Survival in a Release-Recapture Study, with Applications to Snake River Salmonids
- paper by Alan Lowther and John Skalski
- Design and Analysis of Salmonid Tagging Studies in the Columbia Basin, Volume VIII: A new model for estimating survival probabilities and residualization from a release-recapture study of fall chinook salmon (Oncorhynchus tschawytscha) smolts in the Snake River
- paper by Alan Lowther and John Skalski
8 October 1997
- Decadal climate cycles and declining Columbia River salmon
- paper by James Anderson, updated 26 September 1997
2 October 1997
- CRiSP Passage v1.5.4 (Win32 Alpha) is now available
- alpha release of the CRiSP Passage model for Windows 95/NT environment
25 September 1997
- Design and Analysis of Salmonid Tagging Studies in the Columbia Basin, Volume IX: A Comparison of Statistical Methods of Estimating Treatment-Control Ratios (Transportation Benefit Ratios) Based on Spring Chinook Salmon on the Columbia River, 1986-1988
- paper by R Townsend and J Skalski
- Monitoring and Evaluation of Smolt Migration in the Columbia Basin, Volume II: Evaluation of the 1996 Predictions of the Run-Timing of Wild Migrant Subyearling Chinook in the Snake River Basin using Program RealTime
- postseason evaluation by R Townsend, J Skalski, and D Yasuda
15 September 1997
- CRiSP Harvest v3.0.6 is now online
- the manual has been incorporated into the Help system and many bugs have been fixed
6 June 1997
- Mid-Columbia Spill Decision for Outmigration
- decision tree represents decision criteria for managing spill at Priest Rapids and Wanapum Dams -- java applet
5 June 1997
- Total Dissolved Gas (TDG) Forecasts for Snake and Columbia Rivers
- predicts gas production from spill (equations developed by USACE Waterways Experiment Station)
14 April 1997
- Inseason Migratory Forecasts
- the season has started for Snake and Mid-Columbia Yearling Chinook
7 March 1997
- CRiSP Harvest v3.0.5 (Windows 95/NT 32bit)
- maturation rates now included
- Spring and Fall Transition Dates
- provisional data of the spring and fall transitions of coastal winds
19 February 1997
- Evaluation of the 1996 Predictions of the Run-Timing of Wild Migrant Yearling Chinook in the Snake River Basin using Program RealTime
- post season analysis
14 February 1997
- Evaluation of the 1995 Predictions of the Run-Timing of Wild Migrant Subyearling Fall Chinook in the Snake River Basin using Program RealTime
- post season analysis
31 January 1997
- Decadal Scale Climate Pattern and Salmon Survival: Indicators, Interactions and Implications
- paper for NMFS Workshop on Estuaries and Ocean Survival of Salmon held March 1996
- Analysis of reported release and collection results from Cramer (1996) in comparison to CRiSP v1.5.3
- short report
30 January 1997
- What's New in the CRiSP Library
- listing of new documents acquired
13 January 1997
- Evaluation of the 1996 Predictions of the Run-Timing of Wild Migrant Yearling Chinook at Multiple Locations in the Snake and Columbia River Basins using CRiSP/RealTime
- post season analysis
- Radio Telemetry Survey
- juvenile salmon radio tracks
- Harvest Modeling Project
- development of a model for the harvest and migration of salmon on the Pacific coast of NA
27 November 1996
- Columbia River Salmon Passage Harvest Model, CRiSP Harvest v3.0.4 (Windows 95/NT 32bit)
- newest release, the map now includes Mercator projection
22 October 1996
- Climate Indicators of Salmon Survival
- correlation of salmon survival and catch measures with several Pacific Northwest climate indices
17 October 1996
- Pacific Northwest Index PNI
- a composite climate index useful in the study of climate effects on salmon productivity trends
- CRiSP.1 Columbia River Salmon Passage model
- release of CRiSP.1.5.3, demo available as well as new binaries and data to download
10 October 1996
- A model of the travel time of migrating juvenile salmon, with an application to Snake River spring chinook
- accepted by North American Journal of Fisheries Management
- A multiple reach model to describe the migratory behavior of Snake River yearling chinook salmon (Oncorhynchus tshawytscha)
- submitted to Canadian Journal of Fisheries and Aquatic Sciences
10 September 1996
- Snake River yearling chinook travel time estimation
- memo to NMFS
16 August 1996
- Application of a Computer Model to the Sacramento River and Major Tributaries in Regard to Chinook Salmon (Oncorhynchus tshawytscha) Juvenile Migration
- paper on the feasibility of applying the CRiSP model to the Sacramento River system
12 August 1996
- CRiSP validation against preliminary 1996 NMFS survival results
- memo to NMFS
7 August 1996
- CRiSP.1.5 Manuals, Columbia River Salmon Passage Model
- online versions of the User Manual and Theory, Calibration & Validation Manual
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Please direct questions or comments to:
web@cbr.washington.edu
Columbia Basin Research,
School of Aquatic & Fishery Sciences,
University of Washington
Monday, 25-Feb-2008 13:13:46 PST