Publications and Papers

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2021
Barnard D, Brandes PL, LaPlante D, Nichols K, Holbrook C, Buchanan RA. 2016 South Delta Chinook salmon survival study. Ed. P. Brandes and B. Matthias; 2021.
Holbrook C, Towne K, Brandes PL, Nichols K, Buchanan RA, Ammann A, Singer G, Chapman E. 2017 South Delta Chinook salmon survival study. Ed. P. Brandes, G. Castillo, and B. Matthias; 2021.
Townsend RL, Skalski J, Buchanan RA, Lady J. Evaluation of the 2021 predictions of the run-timing of wild and hatchery-reared salmon and steelhead smolts to Rock Island, Lower Granite, McNary, John Day, and Bonneville Dams Using Program RealTime. Monitoring and evaluation of smolt migration in the Columbia Basin Volume XXXIII; 2021.
Buchanan RA, Buttermore E, Israel J. Outmigration Survival of a Threatened Steelhead Population through a Tidal Estuary. Canadian Journal of Fisheries and Aquatic SciencesCanadian Journal of Fisheries and Aquatic Sciences [Internet]. 2021 . Available from: https://doi.org/10.1139/cjfas-2020-0467
Buchanan RA. Rare migration strategy key during climate change. Nature Climate Change [Internet]. 2021 ;11(11):906 - 907. Available from: https://www.nature.com/articles/s41558-021-01192-6
Gosselin JL, Buhle ER, VanHolmes C, Beer WN, Iltis S, Anderson JJ. Role of carryover effects in conservation of wild Pacific salmon migrating regulated rivers. Ecosphere [Internet]. 2021 ;12(7). Available from: https://doi.org/10.1002/ecs2.3618
Gosselin JL. Shifting signals: Correlations Among Freshwater, Marine and Climatic Indices Important for Migratory Animal Studies Crozier LG, Burke BJ. Ecological Indicators. 2021 ;121.
2020
Litzow MA. The changing physical and ecological meanings of North Pacific Ocean climate indices Gosselin JL. Proceedings of the National Academy of Sciences. 2020 ;117:7665-7671.
VanHolmes C, Gosselin JL. Development of a Mean Annual Temperature Value for the Continued Calculation of the Pacific Northwest Climate Index. Seattle: Columbia Basin Research, University of Washington; 2020. Available from: sites/default/files/papers/Olga_Surrogate_DFA_FINAL.pdf
Hess JE, Smith JJ, Timoshevskaya N, Baker C, Caudill CC, Graves D, Keefer ML, Kinziger AP, Moser ML, Porter LL, et al. Genomic islands of divergence infer a phenotypic landscape in Pacific lamprey. Molecular Ecology [Internet]. 2020 ;29(20):3841 - 3856. Available from: https://onlinelibrary.wiley.com/toc/1365294x/29/20
Whitlock SL, Womble JN, Peterson JT. Modelling pinniped abundance and distribution by combining counts at terrestrial sites and in-water sightings. Ecological Modelling [Internet]. 2020 ;420:108965. Available from: https://linkinghub.elsevier.com/retrieve/pii/S0304380020300375
Skalski JR, Whitlock SL, Townsend RL, Harnish RA. Passage and Survival of Juvenile Salmonid Smolts through Dams in the Columbia and Snake Rivers, 2010–2018. North American Journal of Fisheries Management [Internet]. 2020 . Available from: https://doi.org/10.1002/nafm.10572
Munsch SH. Potential for ecological nonlinearities and thresholds to inform Pacific salmon management Gosselin JL. Ecosphere. 2020 ;11(12).
Litzow MA. Quantifying a Novel Climate Through Changes in PDO-Climate and PDO-Salmon Relationships Gosselin JL. Geophysical Research Letters. 2020 ;47.
Buchanan RA, Skalski JR. Relating survival of fall-run Chinook Salmon through the San Joaquin delta to river flow. Environmental Biology of Fishes. 2020 ;103:389-410.
Gosselin JL, Anderson JJ. Step-patterned survivorship curves: Mortality and loss of equilibrium responses to high temperature and food restriction in juvenile rainbow trout (Oncorhynchus mykiss). PLoS ONE. 2020 ;15(5).
Whitlock SL, Lewis TM, Peterson JT. Using a Bayesian Multistate Occupancy Model to Assess Seabird and Shorebird Status in Glacier Bay, Alaska. Wildlife Society Bulletin [Internet]. 2020 ;44(3):451 - 467. Available from: https://onlinelibrary.wiley.com/toc/23285540/44/3
Skalski JR, Whitlock SL. Vitality models found useful in modeling tag-failure times in acoustic-tag survival studies. [Internet]. 2020 ;8(1):26. Available from: https://doi.org/10.1186/s40317-020-00213-z
2018
Buchanan RA, Brandes PL, Marshall M, Nichols K, Ingram J, LaPlante D, Israel J. 2013 South Delta Chinook Salmon Survival Study. Lodi: U.S. Fish & Wildlife Service, Lodi Fish & Wildlife Office; 2018 p. 139. Available from: https://www.fws.gov/lodi/salmonid_survival_studies/juvenile_salmonid_survival_reports.htm
Buchanan RA. 2014 Six-Year Acoustic Telemetry Steelhead Study: Statistical Methods and Results. Seattle: Columbia Basin Research, School of Aquatic & Fishery Sciences, University of Washington; 2018. Available from: sites/default/files/papers/UW 6yr steelhead report 2014 FINAL.PDF
Buchanan RA, Brandes PL, Ingram J, Marshall M, Nichols K, LaPlante D, Barnard D, Towne K, Israel J. 2014 South Delta Chinook Salmon Survival Study. Lodi: U.S. Fish & Wildlife Service, Lodi Fish & Wildlife Office; 2018 p. 228. Available from: https://www.fws.gov/lodi/salmonid_survival_studies/juvenile_salmonid_survival_reports.htm
Buchanan RA. 2015 Six-Year Acoustic Telemetry Steelhead Study: Statistical Methods and Results. Seattle: Columbia Basin Research, School of Aquatic and Fishery Sciences, University of Washington; 2018. Available from: sites/default/files/papers/UW 6yr steelhead report 2015 FINAL.pdf
Buchanan RA, Barnard D, Brandes PL, Towne K, Ingram J, Nichols K, Israel J. 2015 South Delta Chinook Salmon Survival Study. Lodi: U.S. Fish & Wildlife Service, Lodi Fish & Wildlife Office; 2018 p. 208. Available from: https://www.fws.gov/lodi/salmonid_survival_studies/juvenile_salmonid_survival_reports.htm
Buchanan RA. 2016 Six-Year Acoustic Telemetry Steelhead Study: Statistical Methods and Results. Seattle: Columbia Basin Research, School of Aquatic and Fishery Sciences, University of Washington; 2018. Available from: sites/default/files/papers/UW 6yr steelhead report 2016 FINAL.pdf
Gosselin JL. Conservation planning for freshwater-marine carryover effects on Chinook salmon survival Zabel RW, Anderson JJ, Faulkner JR, Baptista AM, Sandford BP. Ecology and Evolution. 2018 ;3:319-332.
Whitlock SL, Quist MC, Dux AM. Effects of Water-Level Management and Hatchery Supplementation on Kokanee Recruitment in Lake Pend Oreille, Idaho. Northwest Science [Internet]. 2018 ;92(2):136 - 148. Available from: http://www.bioone.org/doi/10.3955/046.092.0206
Beer WN, Steel AE. Impacts and Implications of Temperature Variability on Chinook Salmon Egg Development and Emergence Phenology. Transactions of the American Fisheries Society [Internet]. 2018 ;147(1):3 - 15. Available from: https://onlinelibrary.wiley.com/doi/10.1002/tafs.10025
Gosselin JL. Snake River Juvenile Salmon and Steelhead Transportation Synthesis Report VanHolmes C, Iltis S, Anderson JJ. [Internet]. 2018 . Available from: sites/default/files/papers/Transportation Synthesis Report FINAL 2018-04-03.pdf
Gosselin JL. Snake River Juvenile Salmon and Steelhead Transportation Synthesis Report, Appendix: References with abstracts and summaries VanHolmes C, Iltis S, Anderson JJ. [Internet]. 2018 . Available from: sites/default/files/papers/Transportation Synthesis - Appendix - Abstracts - 180403.pdf
Buchanan RA, Brandes PL, Skalski JR. Survival of Juvenile Fall‐Run Chinook Salmon through the San Joaquin River Delta, California, 2010–2015. North American Journal of Fisheries Management. 2018 ;38(3):663-679.
Whitlock SL, Campbell MR, Quist MC, Dux AM. Using Genetic and Phenotypic Comparisons to Evaluate Apparent Segregation among Kokanee Spawning Groups. Transactions of the American Fisheries Society [Internet]. 2018 ;147(1):43 - 60. Available from: https://onlinelibrary.wiley.com/doi/10.1002/tafs.10017
2016
Perry RW, Buchanan RA, Brandes PL, Burau J, Israel JA. Anadromous salmonids in the delta: new science 2006–2016. San Francisco Estuary and Watershed Science [Internet]. 2016 ;14(2). Available from: https://escholarship.org/uc/item/27f0s5kh