Publications and Papers

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1997
Zabel RW, Anderson JJ. A model of the travel time of migrating juvenile salmon, with an application to Snake River spring chinook. North American Journal of Fisheries Management [Internet]. 1997 ;17:93-100. Available from: http://dx.doi.org/10.1577/1548-8675(1997)017<0093:AMOTTT>2.3.CO;2
Beer WN, Anderson JJ. Modelling the Growth of Salmonid Embryos. Journal of Theoretical Biology [Internet]. 1997 ;189:297-306. Available from: http://dx.doi.org/10.1006/jtbi.1997.0515
Lowther AB, Skalski JR. A new model for estimating survival probabilities and residualization from a release-recapture study of fall chinook salmon (Oncorhynchus tschawytscha) smolts in the Snake River. Design and Analysis of Salmonid Tagging Studies in the Columbia Basin [Internet]. 1997 ;VIII. Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=02341-6
Norris JG. Review of Salmon Management Model Migration Algorithms DRAFT. [Internet]. 1997 . Available from: sites/default/files/papers/mig.pdf
Norris JG. A Simple Spreadsheet Model For Evaluating Recovery Strategies For Snake River Fall Chinook Salmon. [Internet]. 1997 . Available from: sites/default/files/papers/global.pdf
Salinger DH. A Splitting Algorithm for Multistage Stochastic Programming with Application to Hydropower Scheduling. 1997 .
Anderson JJ. Testimony of James J. Anderson before the U.S. House of Representatives Subcommittee on Water and Power in Lewiston, Idaho, May 31, 1997. [Internet]. 1997 . Available from: sites/default/files/papers/anderson/testimonies/house_water.power_97.pdf
Gove NE. Using age-at-harvest data to estimate demographic parameters for wildlife populations. Quantitative Ecology and Resource Management. 1997 ;M.S.
1998
Ryding KE. Analyzing adult returns to assess ocean effects and salmon survival relationships. Quantitative Ecology and Resource Management. 1998 ;M.S.
Lady JM, Skalski JR. Estimators of stream residence time of Pacific salmon (Oncorhynchus spp.) based on release-recapture data. Canadian Journal of Fisheries and Aquatic Sciences [Internet]. 1998 ;55:2580-2587. Available from: http://dx.doi.org/10.1139/f98-132
Beer WN. Growth of Snake River chinook salmon, DRAFT. [Internet]. 1998 . Available from: sites/default/files/papers/growth/fishgrow4.pdf
Zabel RW, Anderson JJ, Shaw P. A multiple reach model to describe the migratory behavior of Snake River yearling chinook salmon (Oncorhynchus tshawytscha). Canadian Journal of Fisheries and Aquatic Sciences [Internet]. 1998 ;55:658-667. Available from: http://dx.doi.org/10.1139/f97-281
Anderson JJ. Testimony of James J. Anderson Associate Professor, School of Fisheries, University of Washington, Before The U.S. House of Representatives Committee on Resources, September 2, 1998 Pasco, Washington. [Internet]. 1998 . Available from: sites/default/files/papers/anderson/testimonies/house_resource_98.pdf
Anderson JJ. Testimony of James J. Anderson before the U.S. Senate Subcommittee on Water and Power in Vancouver, Washington, February 17, 1998. [Internet]. 1998 . Available from: sites/default/files/papers/anderson/testimonies/senate_water_98.pdf
Skalski JR, Smith SG, Iwamoto RN, Williams JG, Hoffmann A. Use of passive integrated transponder tags to estimate survival of migrant juvenile salmonids in the Snake and Columbia rivers. Canadian Journal of Fisheries and Aquatic Sciences [Internet]. 1998 ;55:1484-1493. Available from: http://dx.doi.org/10.1139/cjfas-55-6-1484
1999
Beer WN. Application of the Out-Migrant Survival Simulator using the SWARM modeling environment to study smolt-predator interactions: Modeling Support to Army Corps of Engineers Columbia River Fisheries Programs, DRAFT. [Internet]. 1999 . Available from: sites/default/files/papers/swarm.report.coe.fm.pdf
Norris JG, Frever T, Iltis S. Coast Model Documentation Manual. [Internet]. 1999 . Available from: sites/default/files/manuals/coastmodel.pdf
Beer WN. Comparison of mechanistic and empirical methods for modeling embryo and alevin development in Chinook salmon. North American Journal of Aquaculture [Internet]. 1999 ;61:126-134. Available from: http://dx.doi.org/10.1577/1548-8454(1999)061<0126:COMAEM>2.0.CO;2
Townsend RL, Skalski JR, Yasuda D. Evaluation of the 1997 predictions of run-timing of wild migrant yearling and subyearling chinook and sockeye in the Snake River Basin using program RealTime. Monitoring and Evaluation of Smolt Migration in the Columbia Basin [Internet]. 1999 ;III. Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=91572-6
Beer WN, Hayes JA, Shaw P, Zabel RW, Anderson JJ. Evaluation of the 1998 Predictions of the Run-Timing of Wild Migrant Yearling Chinook and Water Quality at Multiple Locations on the Snake and Columbia Rivers using CRiSP/RealTime. [Internet]. 1999 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=02347-1
Burgess C, Townsend RL, Skalski JR. Evaluation of the 1998 Predictions of the Run-Timing of Wild Migrant Yearling and Subyearling Chinook and Steelhead, and Hatchery Sockeye in the Snake River Basin using Program RealTime. Monitoring and Evaluation of Smolt Migration in the Columbia Basin [Internet]. 1999 ;IV. Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=91572-7
Helu LS, Anderson JJ, Sampson DB. An individual-based fishery model and assessing fishery stability. Natural Resource Modeling [Internet]. 1999 ;12. Available from: http://dx.doi.org/10.1111/j.1939-7445.1999.tb00011.x
Steel AE. In-stream factors affecting juvenile salmonid migration, DRAFT. [Internet]. 1999 . Available from: sites/default/files/papers/diss824.pdf
Ryding KE, Skalski JR. Multivariate regression relationships between ocean conditions and early marine survival of coho salmon (Oncorhynchus kisutch). Canadian Journal of Fisheries and Aquatic Sciences [Internet]. 1999 ;56:2374-2384. Available from: http://dx.doi.org/10.1139/cjfas-56-12-2374
Kropp S. Optimization of Spill for Reduction of Dam and Reservoir Mortality in CRiSP: Modeling Support to Army Corps of Engineers Columbia River Fisheries Programs, DRAFT. [Internet]. 1999 . Available from: sites/default/files/papers/spilldraft.pdf
Anderson JJ. A Personal In-side Review of PATH. [Internet]. 1999 . Available from: sites/default/files/papers/anderson/handout.pdf
Skalski JR. Statistical Sampling Plan for the 1999 Lower Granite Dam Hydroacoustic Studies. [Internet]. 1999 . Available from: sites/default/files/papers/Skalski/Skalski 1999 - Stat Sampling Plan for LGR in 1999.pdf
Anderson JJ. Testimony of James J. Anderson before the U.S. House of Representatives Committee on Resources Subcommittee on Water and Power and Subcommittee on Fisheries, Conservation, Wildlife and Oceans held in the Longworth House Office Building Washington D.C. May. [Internet]. 1999 . Available from: sites/default/files/papers/anderson/testimonies/house_resource_99.pdf
Anderson JJ. Testimony of James J. Anderson before the U.S. Senate Subcommittee on Water and Power in Hood River, Oregon, April 6, 1999. [Internet]. 1999 . Available from: sites/default/files/papers/anderson/testimonies/senate_water_99.pdf
2000
Beer WN, Anderson JJ. Application of the Out-Migrant Survival Simulator (OMSS) using the SWARM modeling environment to study smolt-predator interactions. [Internet]. 2000 . Available from: sites/default/files/papers/swarmfest.pdf
Anderson JJ, Beer WN, Frever T, Hayes JA, Iltis S, Moore MP, Salinger DH, Shaw P, VanHolmes C, Zabel RW. Columbia River Salmon Passage Model CRiSP.1.6 Theory and Calibration. [Internet]. 2000 . Available from: sites/default/files/manuals/crisp16_tc.pdf
Anderson JJ, Knudsen EE. Decadal climate cycles and declining Columbia River salmon. In: Sustainable Fisheries Management: Pacific Salmon. Sustainable Fisheries Management: Pacific Salmon. New York: CRC Press LLC; 2000. pp. 467-484. Available from: sites/default/files/papers/anderson/victoria.pdf
Norris JG, Knudsen EE. Defining equivalent exploitation rate reduction policies for endangered salmon stocks. In: Sustainable Fisheries Management: Pacific Salmon. Sustainable Fisheries Management: Pacific Salmon. New York: CRC Press LLC; 2000. pp. 451-466.
Anderson JJ, Hinrichsen RA, VanHolmes C. Effects of Flow Augmentation on Snake River Fall Chinook. [Internet]. 2000 . Available from: sites/default/files/papers/anderson/flowaug_fch.pdf
Burgess C, Skalski JR. Evaluation of the 1999 Predictions of the Run-Timing of Wild Migrant Yearling and Subyearling Chinook Salmon & Steelhead Trout, & Hatchery Sockeye Salmon in the Snake River Basin using Program RealTime. Monitoring and Evaluation of Smolt Migration in the Columbia Basin [Internet]. 2000 ;V. Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=91572-4
Beer WN, Iltis S, VanHolmes C, Anderson JJ. Evaluation of the 1999 Predictions of the Run-Timing of Wild Migrant Yearling Chinook and Water Quality at Multiple Locations on the Snake and Columbia Rivers using CRiSP/RealTime. [Internet]. 2000 . Available from: sites/default/files/papers/PO.99.pdf
Anderson JJ. Heat Budget of Water Flowing through Hells Canyon and the Effect of Flow Augmentation on Snake River Water Temperature DRAFT. [Internet]. 2000 . Available from: sites/default/files/papers/anderson/SRheatbudget.pdf
Anderson JJ, Zabel RW, Hinrichsen RA. Modeling the impacts of John Day drawdown on the survival of salmonid stocks. [Internet]. 2000 . Available from: sites/default/files/papers/anderson/john.day.jan12.pdf
Anderson JJ. Testimony of James J. Anderson before the Subcommittee on Fisheries, Wildlife and Water of the Senate Committee on Environment and Public Works held in Boise, Idaho, November 20, 2000. [Internet]. 2000 . Available from: sites/default/files/papers/anderson/testimonies/senate_fish_2000.pdf
Anderson JJ. Testimony of James J. Anderson before the Subcommittee on Water and Power of the Senate Energy and Natural Resources Committee held in Cascade Locks, Oregon, April 18, 2000. [Internet]. 2000 . Available from: sites/default/files/papers/anderson/testimonies/senate_water_2000.pdf