Publications and Papers

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2010
Beer WN, Iltis S, Anderson JJ. Evaluation of the 2009 Predictions of Run-size and Passage Distributions of Adult Chinook Salmon (Oncorhynchus tschawytscha) Returning to the Columbia and Snake Rivers. [Internet]. 2010 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P116012
Beer WN, Iltis S, Anderson JJ. Evaluation of the 2009 Predictions of Run-Timing and Survival of Wild Migrant Yearling Chinook and Steelhead on the Columbia and Snake Rivers. [Internet]. 2010 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P116013
Townsend RL, Westhagen P, Skalski JR. Evaluation of the 2009 Predictions of the Run-Timing of Wild and Hatchery-Reared Migrant Salmon and Steelhead Smolts to Rock Island, Lower Granite, McNary, John Day, and Bonneville Dams using Program RealTime. Monitoring and Evaluation of Smolt Migration in the Columbia Basin [Internet]. 2010 ;XIX. Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P115115
Bracis C. A model of the ocean migration of Pacific salmon. [Internet]. 2010 . Available from: sites/default/files/papers/BracisThesis.pdf
Skalski JR, Liao S, Buchanan RA. Performance of Three Alternative Estimators of Stream Residence Time Based on Live and Dead Counts of Salmonids. North American Journal of Fisheries Management [Internet]. 2010 ;30:191-208. Available from: http://dx.doi.org/10.1577/M08-237.1
Beer WN, Anderson JJ. Predicting and Monitoring Adult Spring Chinook Salmon Migration on the Columbia River in 2009. [Internet]. 2010 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P116033
Parsons AL, Skalski JR. Quantitative Assessment of Salmonid Escapement Techniques. Reviews in Fisheries Science [Internet]. 2010 ;18:301-314. Available from: http://dx.doi.org/10.1080/10641262.2010.513020
Beer WN, Anderson JJ. Sensitivity of juvenile salmonid growth to future climate trends. River Research and Applications [Internet]. 2010 . Available from: http://dx.doi.org/10.1002/rra.1390
Perry R. Survival and migration dynamics of juvenile Chinook salmon (Oncorhynchus tshawytscha ) in the Sacramento-San Joaquin River Delta. School of Aquatic & Fishery Sciences. 2010 ;Ph.D.
Clawson MV. Use of age-at-harvest information to inform wildlife management. School of Forest Resources. 2010 ;M.S.
Buchanan RA, Skalski JR. Using multistate mark-recapture methods to model adult salmonid migration in an industrialized river. Ecological Modelling [Internet]. 2010 ;221:582-589. Available from: http://dx.doi.org/10.1016/j.ecolmodel.2009.11.014
2011
Gosselin JL. Cumulative Experiences and Heterogeneity Affect Fish Survival:Examples from a model species (Poecilia reticulata) and salmonid species (Oncorhynchus spp.). School of Aquatic and Fishery Sciences [Internet]. 2011 ;Doctor of Philosophy:211. Available from: sites/default/files/papers/GosselinDissertation.pdf
Beer WN, Iltis S, Anderson JJ. Evaluation of the 2010 Predictions of Run-size and Passage Distributions of Adult Chinook Salmon (Oncorhynchus tschawytscha) Returning to the Columbia and Snake Rivers. [Internet]. 2011 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P121108
Beer WN, Iltis S, Anderson JJ. Evaluation of the 2010 Predictions of Run-Timing and Survival of Wild Migrant Yearling Chinook and Steelhead on the Columbia and Snake Rivers. [Internet]. 2011 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P121107
Townsend RL, Westhagen P, Skalski JR. Evaluation of the 2010 Predictions of the Run-Timing of Wild and Hatchery-Reared Salmon and Steelhead Smolts to Rock Island, Lower Granite, McNary, John Day, and Bonneville Dams using Program RealTime. [Internet]. 2011 . Available from: sites/default/files/papers/Skalski/M&E Volume XX (2010 RealTime Report).pdf
Townsend RL, Westhagen P, Skalski JR. Evaluation of the 2011 Predictions of the Run-Timing of Wild and Hatchery-Reared Salmon and Steelhead Smolts to Rock Island, Lower Granite, McNary, John Day, and Bonneville Dams using Program RealTime. [Internet]. 2011 . Available from: sites/default/files/papers/Skalski/M&E Volume XXI (2011 RealTime Report).pdf
Gast CM. Fixed and random effects models and multistate estimation procedures for statistical population reconstructions. Quantitative Ecology and Resource Management. 2011 ;Ph.D.
Beer WN, Anderson JJ. Predicting and Monitoring Adult Spring Chinook Salmon Migration on the Columbia River in 2011. [Internet]. 2011 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P126070
Beer WN, Anderson JJ. Predicting and Monitoring Adult Spring Chinook Salmon Migration on the Columbia River in 2010. [Internet]. 2011 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P121106
McMichael GA, Skalski JR, Deters KA. Survival of Juvenile Chinook Salmon during Barge Transport. North American Journal of Fisheries Management [Internet]. 2011 ;31:1187-1196. Available from: http://dx.doi.org/10.1080/02755947.2011.646455
Li T. Visualize the Intrinsic and Extrinsic Processes that Determine the Patterns of Human Mortality. [Internet]. 2011 . Available from: sites/default/files/papers/li_ting_dissertation.pdf
2012
Skalski JR, Steig TW, Hemstrom S. Assessing compliance with fish survival standards: a case study at Rock Island Dam, Washington. Environmental Science & Policy [Internet]. 2012 ;18:45-51. Available from: http://dx.doi.org/10.1016/j.envsci.2012.01.001
Beer WN, Anderson JJ. Effect of spill on adult salmon passage delay at Columbia River and Snake River dams. [Internet]. 2012 . Available from: sites/default/files/papers/Spill.and.Passage.whitepaper.2012.pdf
Enders EC, Gessel MH, Anderson JJ, Williams JG. Effects of Decelerating and Accelerating Flows on Juvenile Salmonid Behavior. Transactions of the American Fisheries Society [Internet]. 2012 ;141(2):357-364. Available from: http://dx.doi.org/10.1080/00028487.2012.664604
Beer WN, Iltis S, Anderson JJ. Evaluation of the 2011 Predictions of Run-size and Passage Distributions of Adult Chinook Salmon (Oncorhynchus tschawytscha) Returning to the Columbia and Snake Rivers. [Internet]. 2012 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P127362
Beer WN, Iltis S, Anderson JJ. Evaluation of the 2011 Predictions of Run-Timing and Survival of Wild Migrant Yearling Chinook and Steelhead on the Columbia and Snake Rivers. [Internet]. 2012 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P126069
Bracis C, Anderson JJ. An investigation of the geomagnetic imprinting hypothesis for salmon. Fisheries Oceanography [Internet]. 2012 ;21:170-181. Available from: http://dx.doi.org/10.1111/j.1365-2419.2012.00617.x
Widener D. Migration and bioenergetics of juvenile Snake River fall Chinook salmon. [Internet]. 2012 . Available from: sites/default/files/papers/widener_thesis.pdf
Passolt G. A Predator Susceptibility Model of Juvenile Salmon Survival and a Voronoi Tessellation-based Approach for Generating Hypothetical Forest Landscapes. [Internet]. 2012 . Available from: sites/default/files/papers/Passoltmasters.pdf
Kemp PS, Anderson JJ, Vowles AS. Quantifying behaviour of migratory fish: application of signal detection theory to fisheries engineering. Ecological Engineering [Internet]. 2012 ;41:22-31. Available from: http://dx.doi.org/10.1016/j.ecoleng.2011.12.013
Anderson JJ, Gosselin JL, Ham KD. Snake River Basin Differential Delayed Mortality Synthesis: Appendix A References, Abstracts, and Executive Summaries of Research Related to Differential Delayed Mortality. [Internet]. 2012 . Available from: sites/default/files/papers/PNWD-4283_Differential_Delayed_Mortality_Final_Report_Appendices.pdf
Anderson JJ, Gosselin JL, Ham KD. Snake River Basin Differential Delayed Mortality Synthesis: Final Report. [Internet]. 2012 . Available from: sites/default/files/papers/PNWD-4283_Differential_Delayed_Mortality_Final_Report.pdf
Anon. Sustainable Water and Environmental Management in the California Bay-Delta. The National Academies Press; 2012 p. 280. Available from: http://www.nap.edu/openbook.php?record_id=13394
2013
Skalski J, Seaburg AG, Buchanan RA. The effects of high detection probabilities on model selection in paired release-recapture studies in the era of electronic tagging studies. [Internet]. 2013 ;1(1):12. Available from: https://doi.org/10.1186/2050-3385-1-12
Beer WN, Iltis S, Anderson JJ. Evaluation of the 2012 Predictions of Run-size and Passage Distributions of Adult Chinook Salmon [Oncorhynchus tschawytscha] Returning to the Columbia and Snake Rivers. [Internet]. 2013 . Available from: https://pisces.bpa.gov/release/documents/DocumentViewer.aspx?doc=P132681
Beer WN, Iltis S, Anderson JJ. Evaluation of the 2012 Predictions of Run-Timing and Survival of Wild Migrant Yearling Chinook and Steelhead on the Columbia and Snake Rivers. [Internet]. 2013 . Available from: https://pisces.bpa.gov/release/documents/DocumentViewer.aspx?doc=P132683
Beer WN, Anderson JJ. Predicting and monitoring adult spring Chinook salmon migration on the Columbia River in 2012. [Internet]. 2013 . Available from: https://pisces.bpa.gov/release/documents/DocumentViewer.aspx?doc=P132731
Gosselin JL, Anderson JJ. Resource competition induces heterogeneity and can increase cohort survivorship: selection-event duration matters. Oecologia. 2013 ;173(4):1321-1331.
Buchanan RA, Skalski J, Brandes PL, Fuller A. Route Use and Survival of Juvenile Chinook Salmon through the San Joaquin River Delta. North American Journal of Fisheries ManagementNorth American Journal of Fisheries Management [Internet]. 2013 ;33(1):216 - 229. Available from: https://doi.org/10.1080/02755947.2012.728178
Perry R, Brandes PL, Burau JR, Klimley PA, MacFarlane B, Michel C, Skalski JR. Sensitivity of survival to migration routes used by juvenile Chinook salmon to negotiate the Sacramento-San Joaquin River Delta. Environmental Biology of Fishes. 2013 ;96(2-3):381 - 392.