Buchanan RA, Brandes PL, Skalski JR. Survival of Juvenile Fall‐Run Chinook Salmon through the San Joaquin River Delta, California, 2010–2015. North American Journal of Fisheries Management. 2018 ;38(3):663-679.

Perry R, Brandes PL, Burau JR, Klimley PA, MacFarlane B, Michel C, Skalski JR. Sensitivity of survival to migration routes used by juvenile Chinook salmon to negotiate the Sacramento-San Joaquin River Delta. Environmental Biology of Fishes. 2013 ;96(2-3):381 - 392.

McMichael GA, Skalski JR, Deters KA. Survival of Juvenile Chinook Salmon during Barge Transport. North American Journal of Fisheries Management [Internet]. 2011 ;31:1187-1196. Available from: http://dx.doi.org/10.1080/02755947.2011.646455

Parsons AL, Skalski JR. A Statistical Critique of Estimating Salmon Escapement in the Pacific Northwest. Design and Analysis of Salmonid Tagging Studies in the Columbia Basin [Internet]. 2009 ;XXIV. Available from: sites/default/files/papers/Skalski/D&A Volume 24 (Salmon Escapement).pdf

Skalski JR, Griswold J. A Summary of Methods for Conducting Salmonid Fry Mark-Recapture Studies for Estimating Survival in Tributaries. Design and Analysis of Salmonid Tagging Studies in the Columbia Basin [Internet]. 2006 ;XXI. Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=00025091-2

Skalski JR. Statistical Framework for Monitoring Basal Area Coverage of Eelgrass in Puget Sound. [Internet]. 2003 . Available from: sites/default/files/papers/Skalski/Skalski 2003 - Stat Framework for Basal Area Coverage of Eelgrass.pdf

Skalski JR. Statistical Sampling Plan for the 1999 Lower Granite Dam Hydroacoustic Studies. [Internet]. 1999 . Available from: sites/default/files/papers/Skalski/Skalski 1999 - Stat Sampling Plan for LGR in 1999.pdf