Beer WN, Anderson JJ. Predicting and Monitoring Spring Chinook Salmon Migrations on the Columbia River. [Internet]. 2009 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P111392

Beer WN, Anderson JJ. Predicting and Monitoring Adult Spring Chinook Salmon Migration on the Columbia River in 2010. [Internet]. 2011 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P121106

Beer WN, Anderson JJ. Predicting and monitoring adult spring Chinook salmon migration on the Columbia River in 2013. [Internet]. 2014 . Available from: https://pisces.bpa.gov/release/documents/DocumentViewer.aspx?doc=P137744

Beer WN, Anderson JJ. Predicting and Monitoring Adult Spring Chinook Salmon Migration on the Columbia River in 2011. [Internet]. 2011 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P126070

Beer WN, Anderson JJ. Predicting and Monitoring Adult Spring Chinook Salmon Migration on the Columbia River in 2009. [Internet]. 2010 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P116033

Beer WN, Anderson JJ. Predicting and monitoring adult spring Chinook salmon migration on the Columbia River in 2014. [Internet]. 2015 . Available from: https://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P148590

Beer WN, Anderson JJ. Predicting and monitoring adult spring Chinook salmon migration on the Columbia River in 2012. [Internet]. 2013 . Available from: https://pisces.bpa.gov/release/documents/DocumentViewer.aspx?doc=P132731

Holmes CV, Anderson JJ. Predicted Fall Chinook Survival and Passage Timing Under BiOp and Alternative Summer Spill Programs Using CRiSP. [Internet]. 2003 . Available from: sites/default/files/papers/2003SummerSpill.pdf

Holmes CV, Anderson JJ. Predicted Fall Chinook Survival and Passage Timing Under BiOp and Alternative Summer Spill Programs Using the Columbia River Salmon Passage Model. [Internet]. 2004 . Available from: sites/default/files/papers/2004SummerSpill.pdf

Passolt G. A Predator Susceptibility Model of Juvenile Salmon Survival and a Voronoi Tessellation-based Approach for Generating Hypothetical Forest Landscapes. [Internet]. 2012 . Available from: sites/default/files/papers/Passoltmasters.pdf

Feist BE, Anderson JJ, Miyamoto R. Potential Impacts of Pile Driving on Juvenile Pink (Oncorhynchus gorbuscha) and Chum (O. keta) Salmon Behavior and Distribution. [Internet]. 1992 . Available from: sites/default/files/papers/FRI-UW-9603.pdf

Feist BE. Potential Impacts of Pile Driving on Juvenile Pink (Oncorhynchus gorbuscha) and Chum (O. keta) Salmon Behavior and Distribution. [Internet]. 1991 . Available from: sites/default/files/papers/Feist1991UWMSThesis.pdf

Munsch SH. Potential for ecological nonlinearities and thresholds to inform Pacific salmon management Gosselin JL. Ecosphere. 2020 ;11(12).

Anderson JJ. A Personal In-side Review of PATH. [Internet]. 1999 . Available from: sites/default/files/papers/anderson/handout.pdf

Skalski JR, Liao S, Buchanan RA. Performance of Three Alternative Estimators of Stream Residence Time Based on Live and Dead Counts of Salmonids. North American Journal of Fisheries Management [Internet]. 2010 ;30:191-208. Available from: http://dx.doi.org/10.1577/M08-237.1

Salinger DH, Anderson JJ, Hamel OS. A parameter estimation routine for the vitality-based survival model. Ecological Modelling [Internet]. 2003 ;166:287-294. Available from: http://dx.doi.org/10.1016/S0304-3800(03)00162-5

Nestler JM, Goodwin RA, Smith DL, Anderson JJ, Li S. Optimum fish passage and guidance designs are based in the hydrogeomorphology of natural rivers. River Research and Applications [Internet]. 2008 ;24:148-168. Available from: http://dx.doi.org/10.1002/rra.1056

Kropp S. Optimization of Spill for Reduction of Dam and Reservoir Mortality in CRiSP: Modeling Support to Army Corps of Engineers Columbia River Fisheries Programs, DRAFT. [Internet]. 1999 . Available from: sites/default/files/papers/spilldraft.pdf

Hinrichsen RA. Optimization Models For Understanding Migration Patterns of Juvenile Chinook Salmon. [Internet]. 1994 . Available from: sites/default/files/papers/hinrich/dissertation.pdf

Anderson JJ, Beer WN. Oceanic, riverine, and genetic influences on spring chinook salmon migration timing. Ecological Applications [Internet]. 2009 ;19:1989-2003. Available from: http://dx.doi.org/10.1890/08-0477.1

Anderson JJ. Notes on Snake River Recovery Plan. [Internet]. 1995 . Available from: sites/default/files/papers/winthrop.pdf

Goodwin RA, Nestler JM, Anderson JJ, Weber LJ. A New Tool to Forecast Fish Movement and Passage. Hydro Review [Internet]. 2007 ;26:58-71. Available from: http://www.hydroworld.com/index/display/article-display/354303/articles/hydro-review/volume-26/issue-4/technical-articles/a-new-tool-to-forecast-fish-movement-and-passage.html

Lowther AB, Skalski JR. A new model for estimating survival probabilities and residualization from a release-recapture study of fall chinook salmon (Oncorhynchus tschawytscha) smolts in the Snake River. Design and Analysis of Salmonid Tagging Studies in the Columbia Basin [Internet]. 1997 ;VIII. Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=02341-6

Ryding KE, Skalski JR. Multivariate regression relationships between ocean conditions and early marine survival of coho salmon (Oncorhynchus kisutch). Canadian Journal of Fisheries and Aquatic Sciences [Internet]. 1999 ;56:2374-2384. Available from: http://dx.doi.org/10.1139/cjfas-56-12-2374

Skalski JR, Buchanan RA, Townsend RL, Steig TW, Hemstrom S. A Multiple-Release Model to Estimate Route-Specific and Dam Passage Survival at a Hydroelectric Project. North American Journal of Fisheries Management [Internet]. 2009 ;29:670-679. Available from: http://dx.doi.org/10.1577/M07-227.1

Zabel RW, Anderson JJ, Shaw P. A multiple reach model to describe the migratory behavior of Snake River yearling chinook salmon (Oncorhynchus tshawytscha). Canadian Journal of Fisheries and Aquatic Sciences [Internet]. 1998 ;55:658-667. Available from: http://dx.doi.org/10.1139/f97-281

Lowther AB, Skalski JR. Monte-Carlo Comparison of Confidence Interval Procedures for Estimating Survival in a Release-Recapture Study, with Applications to Snake River Salmonids. Design and Analysis of Salmonid Tagging Studies in the Columbia Basin [Internet]. 1996 ;VII. Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=02341-5

Gurarie E. Models and analysis of animal movements: From individual tracks to mass dispersal. [Internet]. 2008 . Available from: http://wiki.cbr.washington.edu/qerm/sites/qerm/images/9/9f/GurarieDissertationFinalDraft.pdf

Beer WN, Anderson JJ. Modelling upstream migration of Chinook salmon and steelhead trout. [Internet]. Submitted . Available from: https://pisces.bpa.gov/release/documents/DocumentViewer.aspx?doc=P148614

Beer WN, Anderson JJ. Modelling the Growth of Salmonid Embryos. Journal of Theoretical Biology [Internet]. 1997 ;189:297-306. Available from: http://dx.doi.org/10.1006/jtbi.1997.0515

Anderson JJ, Zabel RW, Hinrichsen RA. Modeling the impacts of John Day drawdown on the survival of salmonid stocks. [Internet]. 2000 . Available from: sites/default/files/papers/anderson/john.day.jan12.pdf

Steel AE, Guttorp P, Anderson JJ, Caccia DC. Modeling Juvenile Salmon Migration Using a Simple Markov Chain. Journal of Agricultural, Biological & Environmental Statistics [Internet]. 2001 ;6:80-88. Available from: http://www.jstor.org/stable/1400355

Zabel RW, Anderson JJ. A model of the travel time of migrating juvenile salmon, with an application to Snake River spring chinook. North American Journal of Fisheries Management [Internet]. 1997 ;17:93-100. Available from: http://dx.doi.org/10.1577/1548-8675(1997)017<0093:AMOTTT>2.3.CO;2

Bracis C. A model of the ocean migration of Pacific salmon. [Internet]. 2010 . Available from: sites/default/files/papers/BracisThesis.pdf

Buchanan RA, Skalski JR. A Migratory Life-Cycle Release-Recapture Model for Salmonid PIT-Tag Investigations. Journal of Agricultural, Biological, and Environmental Statistics [Internet]. 2007 ;12:325-345. Available from: http://dx.doi.org/10.1198/108571107X229331

Widener D. Migration and bioenergetics of juvenile Snake River fall Chinook salmon. [Internet]. 2012 . Available from: sites/default/files/papers/widener_thesis.pdf

Norris JG. The Merging of Empirical and Modeling Research: Columbia River Models and Beyond. [Internet]. 1994 . Available from: sites/default/files/papers/fri.cqs.pdf

Anderson JJ, Feist BE, Miyamoto R, McConnell SO. Measurement of Low Frequency Sound at Bonneville, McNary and Lower Granite Dams--1988. [Internet]. 1989 . Available from: sites/default/files/papers/anderson/Anderson1989.pdf

Holmes CV. Mean Spring and Fall Upwelling Transition Dates off the Oregon and Washington Coasts. [Internet]. 2007 . Available from: sites/default/files/papers/trans.cbrmean.pdf

Anderson JJ, Gurarie E, Zabel RW. Mean free-path length theory of predator-prey interactions: Application to juvenile salmon migration. Ecological Modelling [Internet]. 2005 ;186:196-211. Available from: http://dx.doi.org/10.1016/j.ecolmodel.2005.01.014