Anderson JJ. Notes on Snake River Recovery Plan. [Internet]. 1995 . Available from: sites/default/files/papers/winthrop.pdf

Anderson JJ, Beer WN. Oceanic, riverine, and genetic influences on spring chinook salmon migration timing. Ecological Applications [Internet]. 2009 ;19:1989-2003. Available from: http://dx.doi.org/10.1890/08-0477.1

Nestler JM, Goodwin RA, Smith DL, Anderson JJ, Li S. Optimum fish passage and guidance designs are based in the hydrogeomorphology of natural rivers. River Research and Applications [Internet]. 2008 ;24:148-168. Available from: http://dx.doi.org/10.1002/rra.1056

Salinger DH, Anderson JJ, Hamel OS. A parameter estimation routine for the vitality-based survival model. Ecological Modelling [Internet]. 2003 ;166:287-294. Available from: http://dx.doi.org/10.1016/S0304-3800(03)00162-5

Anderson JJ. A Personal In-side Review of PATH. [Internet]. 1999 . Available from: sites/default/files/papers/anderson/handout.pdf

Feist BE, Anderson JJ, Miyamoto R. Potential Impacts of Pile Driving on Juvenile Pink (Oncorhynchus gorbuscha) and Chum (O. keta) Salmon Behavior and Distribution. [Internet]. 1992 . Available from: sites/default/files/papers/FRI-UW-9603.pdf

VanHolmes C, Anderson JJ. Predicted Fall Chinook Survival and Passage Timing Under BiOp and Alternative Summer Spill Programs Using CRiSP. [Internet]. 2003 . Available from: sites/default/files/papers/2003SummerSpill.pdf

VanHolmes C, Anderson JJ. Predicted Fall Chinook Survival and Passage Timing Under BiOp and Alternative Summer Spill Programs Using the Columbia River Salmon Passage Model. [Internet]. 2004 . Available from: sites/default/files/papers/2004SummerSpill.pdf

Beer WN, Anderson JJ. Predicting and Monitoring Adult Spring Chinook Salmon Migration on the Columbia River in 2009. [Internet]. 2010 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P116033

Beer WN, Anderson JJ. Predicting and monitoring adult spring Chinook salmon migration on the Columbia River in 2012. [Internet]. 2013 . Available from: https://pisces.bpa.gov/release/documents/DocumentViewer.aspx?doc=P132731

Beer WN, Anderson JJ. Predicting and monitoring adult spring Chinook salmon migration on the Columbia River in 2014. [Internet]. 2015 . Available from: https://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P148590

Beer WN, Anderson JJ. Predicting and Monitoring Adult Spring Chinook Salmon Migration on the Columbia River in 2010. [Internet]. 2011 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P121106

Beer WN, Anderson JJ. Predicting and Monitoring Adult Spring Chinook Salmon Migration on the Columbia River in 2011. [Internet]. 2011 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P126070

Beer WN, Anderson JJ. Predicting and monitoring adult spring Chinook salmon migration on the Columbia River in 2013. [Internet]. 2014 . Available from: https://pisces.bpa.gov/release/documents/DocumentViewer.aspx?doc=P137744

Beer WN, Anderson JJ. Predicting and Monitoring Spring Chinook Salmon Migrations on the Columbia River. [Internet]. 2009 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P111392

Kemp PS, Anderson JJ, Vowles AS. Quantifying behaviour of migratory fish: application of signal detection theory to fisheries engineering. Ecological Engineering [Internet]. 2012 ;41:22-31. Available from: http://dx.doi.org/10.1016/j.ecoleng.2011.12.013

Hamel OS, Anderson JJ. Relationship between antigen concentration and bacterial load in Pacific salmon with bacterial kidney disease. Diseases of Aquatic Organisms [Internet]. 2002 ;51:85-92. Available from: http://dx.doi.org/10.3354/dao051085

Gosselin JL, Anderson JJ. Resource competition induces heterogeneity and can increase cohort survivorship: selection-event duration matters. Oecologia. 2013 ;173(4):1321-1331.

Anderson JJ, Marmorek DR. Review of the Influence of Climate on Salmon. In: Plan for Analyzing and Testing Hypotheses (PATH): Final report on retrospective analyses for fiscal year 1996. Plan for Analyzing and Testing Hypotheses (PATH): Final report on retrospective analyses for fiscal year 1996. Vancouver, B.C.: ESSA Technologies Ltd; 1996. Available from: sites/default/files/papers/anderson/climate.pdf

Gosselin JL, Buhle ER, VanHolmes C, Beer WN, Iltis S, Anderson JJ. Role of carryover effects in conservation of wild Pacific salmon migrating regulated rivers. Ecosphere [Internet]. 2021 ;12(7). Available from: https://doi.org/10.1002/ecs2.3618

Beer WN, Anderson JJ. Sensitivity of juvenile salmonid growth to future climate trends. River Research and Applications [Internet]. 2010 . Available from: http://dx.doi.org/10.1002/rra.1390

Beer WN, Anderson JJ. Sensitivity of salmon survival to temperature in the mainstem Snake and Columbia Rivers. [Internet]. 2004 . Available from: sites/default/files/papers/beer-anderson2004.pdf

Anderson JJ, Gosselin JL, Ham KD. Snake River Basin Differential Delayed Mortality Synthesis: Appendix A References, Abstracts, and Executive Summaries of Research Related to Differential Delayed Mortality. [Internet]. 2012 . Available from: sites/default/files/papers/PNWD-4283_Differential_Delayed_Mortality_Final_Report_Appendices.pdf

Anderson JJ, Gosselin JL, Ham KD. Snake River Basin Differential Delayed Mortality Synthesis: Final Report. [Internet]. 2012 . Available from: sites/default/files/papers/PNWD-4283_Differential_Delayed_Mortality_Final_Report.pdf

Gosselin JL. Snake River Juvenile Salmon and Steelhead Transportation Synthesis Report, Appendix: References with abstracts and summaries VanHolmes C, Iltis S, Anderson JJ. [Internet]. 2018 . Available from: sites/default/files/papers/Transportation Synthesis - Appendix - Abstracts - 180403.pdf

Gosselin JL. Snake River Juvenile Salmon and Steelhead Transportation Synthesis Report VanHolmes C, Iltis S, Anderson JJ. [Internet]. 2018 . Available from: sites/default/files/papers/Transportation Synthesis Report FINAL 2018-04-03.pdf

Hyun S-Y, Hilborn R, Anderson JJ, Ernst B. A statistical model for in-season forecasts of sockeye salmon (Oncorhynchus nerka) returns to the Bristol Bay districts of Alaska. Canadian Journal of Fisheries and Aquatic Sciences [Internet]. 2005 ;62:1665-1680. Available from: http://dx.doi.org/10.1139/F05-071

Gosselin JL, Anderson JJ. Step-patterned survivorship curves: Mortality and loss of equilibrium responses to high temperature and food restriction in juvenile rainbow trout (Oncorhynchus mykiss). PLoS ONE. 2020 ;15(5).

Anderson JJ. Testimony of James J. Anderson Associate Professor, School of Fisheries, University of Washington, Before The U.S. House of Representatives Committee on Resources, September 2, 1998 Pasco, Washington. [Internet]. 1998 . Available from: sites/default/files/papers/anderson/testimonies/house_resource_98.pdf

Anderson JJ. Testimony of James J. Anderson before the Subcommittee on Fisheries, Wildlife and Water of the Senate Committee on Environment and Public Works held in Boise, Idaho, November 20, 2000. [Internet]. 2000 . Available from: sites/default/files/papers/anderson/testimonies/senate_fish_2000.pdf

Anderson JJ. Testimony of James J. Anderson before the Subcommittee on Water and Power of the Senate Energy and Natural Resources Committee held in Cascade Locks, Oregon, April 18, 2000. [Internet]. 2000 . Available from: sites/default/files/papers/anderson/testimonies/senate_water_2000.pdf

Anderson JJ. Testimony of James J Anderson before the Subcommittee on Water and Power of the U.S. House of Representatives Committee on Resources Held May 19, 2001 in Tacoma, Washington. [Internet]. 2001 . Available from: sites/default/files/papers/anderson/testimonies/house_5_19_2001.pdf

Anderson JJ. Testimony of James J. Anderson before the U.S. House of Representatives Committee on Resources Subcommittee on Water and Power and Subcommittee on Fisheries, Conservation, Wildlife and Oceans held in the Longworth House Office Building Washington D.C. May. [Internet]. 1999 . Available from: sites/default/files/papers/anderson/testimonies/house_resource_99.pdf

Anderson JJ. Testimony of James J. Anderson before the U.S. House of Representatives Subcommittee on Water and Power in Lewiston, Idaho, May 31, 1997. [Internet]. 1997 . Available from: sites/default/files/papers/anderson/testimonies/house_water.power_97.pdf

Anderson JJ. Testimony of James J. Anderson before the U.S. Senate Subcommittee on Water and Power in Vancouver, Washington, February 17, 1998. [Internet]. 1998 . Available from: sites/default/files/papers/anderson/testimonies/senate_water_98.pdf

Anderson JJ. Testimony of James J. Anderson before the U.S. Senate Subcommittee on Water and Power in Hood River, Oregon, April 6, 1999. [Internet]. 1999 . Available from: sites/default/files/papers/anderson/testimonies/senate_water_99.pdf

Anderson JJ. Testimony presented before the Subcommittee on Water and Power of the US House of Representatives Committee on Resources. June 1995 Washington D.C. [Internet]. 1995 . Available from: sites/default/files/papers/anderson/testimonies/house.june.95.pdf

Anderson JJ. Toward a Resolution of the Flow/Survival Debate and the Impacts of Flow Augmentation and Water Withdrawal in the Columbia/Snake River System. [Internet]. 2003 . Available from: sites/default/files/papers/anderson/towards_res.pdf

Anderson JJ. A vitality based model relating stressors and environmental properties to organism survival. Ecological Monographs [Internet]. 2000 ;70:445-470. Available from: http://dx.doi.org/10.1890/0012-9615(2000)070%5B0445:AVBMRS%5D2.0.CO;2

Li T, Anderson JJ. The vitality model: A way to understand population survival and demographic heterogeneity. Theoretical Population Biology [Internet]. 2009 ;76:118-131. Available from: http://dx.doi.org/10.1016/j.tpb.2009.05.004