Publications and Papers

Found 294 results
A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 
Beer WN, Anderson JJ. Modelling the Growth of Salmonid Embryos. Journal of Theoretical Biology [Internet]. 1997 ;189:297-306. Available from:
Whitlock SL, Womble JN, Peterson JT. Modelling pinniped abundance and distribution by combining counts at terrestrial sites and in-water sightings. Ecological Modelling [Internet]. 2020 ;420:108965. Available from:
Anderson JJ, Zabel RW, Hinrichsen RA. Modeling the impacts of John Day drawdown on the survival of salmonid stocks. [Internet]. 2000 . Available from: sites/default/files/papers/anderson/
Steel AE, Guttorp P, Anderson JJ, Caccia DC. Modeling Juvenile Salmon Migration Using a Simple Markov Chain. Journal of Agricultural, Biological & Environmental Statistics [Internet]. 2001 ;6:80-88. Available from:
Zabel RW, Anderson JJ. A model of the travel time of migrating juvenile salmon, with an application to Snake River spring chinook. North American Journal of Fisheries Management [Internet]. 1997 ;17:93-100. Available from:<0093:AMOTTT>2.3.CO;2
Bracis C. A model of the ocean migration of Pacific salmon. [Internet]. 2010 . Available from: sites/default/files/papers/BracisThesis.pdf
Buchanan RA, Skalski JR. A Migratory Life-Cycle Release-Recapture Model for Salmonid PIT-Tag Investigations. Journal of Agricultural, Biological, and Environmental Statistics [Internet]. 2007 ;12:325-345. Available from:
Widener D. Migration and bioenergetics of juvenile Snake River fall Chinook salmon. [Internet]. 2012 . Available from: sites/default/files/papers/widener_thesis.pdf
Norris JG. The Merging of Empirical and Modeling Research: Columbia River Models and Beyond. [Internet]. 1994 . Available from: sites/default/files/papers/fri.cqs.pdf
Anderson JJ, Feist BE, Miyamoto R, McConnell SO. Measurement of Low Frequency Sound at Bonneville, McNary and Lower Granite Dams--1988. [Internet]. 1989 . Available from: sites/default/files/papers/anderson/Anderson1989.pdf
VanHolmes C. Mean Spring and Fall Upwelling Transition Dates off the Oregon and Washington Coasts. [Internet]. 2007 . Available from: sites/default/files/papers/trans.cbrmean.pdf
Anderson JJ, Gurarie E, Zabel RW. Mean free-path length theory of predator-prey interactions: Application to juvenile salmon migration. Ecological Modelling [Internet]. 2005 ;186:196-211. Available from:
Nestler JM, Goodwin RA, Smith DL, Anderson JJ. Mathematical & Conceptual Framework for the New Discipline of Ecohydraulics. In: Wood P, Hannah D, Sadler J Hydroecology and Ecohydrology: Past, Present and Future. Hydroecology and Ecohydrology: Past, Present and Future. New York: Wiley; 2008. pp. 205-224.
Bracis C, Anderson JJ. An investigation of the geomagnetic imprinting hypothesis for salmon. Fisheries Oceanography [Internet]. 2012 ;21:170-181. Available from:
Steel AE. In-stream factors affecting juvenile salmonid migration, DRAFT. [Internet]. 1999 . Available from: sites/default/files/papers/diss824.pdf
Shaw P. Inseason Forecasts Temperature Predictions. [Internet]. 1996 . Available from: inseason/methods
Hyun S-Y. Inseason Forecasts of Sockeye Salmon Returns to the Bristol Bay Districts of Alaska. [Internet]. 2002 . Available from: sites/default/files/papers/hyun_diss.pdf
Whitlock SL, Quist MC, Dux AM. Influence of Habitat Characteristics on Shore-Spawning Kokanee. Transactions of the American Fisheries Society [Internet]. 2014 ;143(6):1404 - 1418. Available from:
Helu LS, Anderson JJ, Sampson DB. An individual-based fishery model and assessing fishery stability. Natural Resource Modeling [Internet]. 1999 ;12. Available from:
Whitlock SL, Quist MC, Dux AM. Incubation success and habitat selection of shore-spawning kokanee Oncorhynchus nerka : effects of water-level regulation and habitat characteristics. Ecology of Freshwater Fish [Internet]. 2015 ;24(3):412 - 423. Available from:
Beer WN, Steel AE. Impacts and Implications of Temperature Variability on Chinook Salmon Egg Development and Emergence Phenology. Transactions of the American Fisheries Society [Internet]. 2018 ;147(1):3 - 15. Available from:
Peven C, Giorgi AE, Skalski JR, Langeslay M, Grassell A, Smith SG, Counihan T, Perry R, Bickford S. Guidelines and Suggested Protocols for Conducting, Analyzing, and Reporting Juvenile Salmonid Survival Studies in the Columbia River Basin. [Internet]. 2005 . Available from: sites/default/files/papers/Guidelines_and_Protocols_FINAL_DRAFT.pdf
Beer WN. Growth of Snake River chinook salmon, DRAFT. [Internet]. 1998 . Available from: sites/default/files/papers/growth/fishgrow4.pdf
Beer WN. A growth model for larval salmon with application to field and laboratory observations of chinook salmon. 1996 .
Schultz LD, Chasco BE, Whitlock SL, Meeuwig MH, Schreck CB. Growth and annual survival estimates to examine the ecology of larval lamprey and the implications of ageing error in fitting models. Journal of Fish Biology [Internet]. 2017 ;90(4):1305 - 1320. Available from:
Hess JE, Smith JJ, Timoshevskaya N, Baker C, Caudill CC, Graves D, Keefer ML, Kinziger AP, Moser ML, Porter LL, et al. Genomic islands of divergence infer a phenotypic landscape in Pacific lamprey. Molecular Ecology [Internet]. 2020 ;29(20):3841 - 3856. Available from:
Pope AC, , Lockhart T, Buchanan RA. Generation of multistate release–recapture models using a graphic user interface (GUI). [Internet]. 2016 ;4(1):23. Available from:
Shaw P. Gas Saturation and Sensitivity Analysis Using CRiSP. [Internet]. 1997 . Available from: sites/default/files/papers/shawpath.pdf