Publications and Papers
Salmon Insider Columbia Basin Research Newsletter Summer 2004. [Internet]. 2004 . Available from: sites/default/files/newsletter/newsletter_2004n3summer.pdf
Salmon Insider Columbia Basin Research Newsletter Winter 2004. [Internet]. 2004 . Available from: sites/default/files/newsletter/newsletter_2004n1winter.pdf
. Sensitivity of salmon survival to temperature in the mainstem Snake and Columbia Rivers. [Internet]. 2004 . Available from: sites/default/files/papers/beer-anderson2004.pdf
. Contaminants as viral cofactors: assessing indirect population effects. Aquatic Toxicology [Internet]. 2005 ;71:13-23. Available from: http://dx.doi.org/10.1016/j.aquatox.2004.10.006
. A cost analysis of ranked set sampling to estimate a population mean. Environmetrics. 2005 ;16.
. Effect of Multiple Turbine Passage on Juvenile Snake River Salmonid Survival. [Internet]. 2005 . Available from: http://www.pnl.gov/main/publications/external/technical_reports/PNNL-15450.pdf
. Estimation of catch parameters from a fishery observer program with multiple objectives. Quantitative Ecology and Resource Management. 2005 ;Ph.D.
. Evaluation of the 2004 Predictions of the Run-Timing of Wild and Hatchery-Reared Migrant Salmon and Steelhead Trout migrating to Lower Granite, Rock Island, McNary, John Day, and Bonneville Dams using Program RealTime. Monitoring and Evaluation of Smolt Migration in the Columbia Basin [Internet]. 2005 ;XII. Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=00013690-4
. Evaluation of Wanapum Dam Bypass Configurations for Outmigrating Juvenile Salmon Using Virtual Fish: Numerical Fish Surrogate (NFS) Analysis. [Internet]. 2005 . Available from: http://el.erdc.usace.army.mil/elpubs/pdf/trel05-7.pdf
. Guidelines and Suggested Protocols for Conducting, Analyzing, and Reporting Juvenile Salmonid Survival Studies in the Columbia River Basin. [Internet]. 2005 . Available from: sites/default/files/papers/Guidelines_and_Protocols_FINAL_DRAFT.pdf
. Mean free-path length theory of predator-prey interactions: Application to juvenile salmon migration. Ecological Modelling [Internet]. 2005 ;186:196-211. Available from: http://dx.doi.org/10.1016/j.ecolmodel.2005.01.014
. Release-recapture models for migrating juvenile and adult salmon in the Columbia and Snake Rivers using PIT tag and radiotelemetry data. Quantitative Ecology and Resource Management. 2005 ;Ph.D.
Salmon Insider Columbia Basin Research Newsletter Autumn 2005. [Internet]. 2005 . Available from: sites/default/files/newsletter/newsletter_2005n4autumn.pdf
Salmon Insider Columbia Basin Research Newsletter Spring 2005. [Internet]. 2005 . Available from: sites/default/files/newsletter/newsletter_2005n2spring.pdf
Salmon Insider Columbia Basin Research Newsletter Summer 2005. [Internet]. 2005 . Available from: sites/default/files/newsletter/newsletter_2005n3summer.pdf
Salmon Insider Columbia Basin Research Newsletter Winter 2005. [Internet]. 2005 . Available from: sites/default/files/newsletter/newsletter_2005n1winter.pdf
. A statistical model for in-season forecasts of sockeye salmon (Oncorhynchus nerka) returns to the Bristol Bay districts of Alaska. Canadian Journal of Fisheries and Aquatic Sciences [Internet]. 2005 ;62:1665-1680. Available from: http://dx.doi.org/10.1139/F05-071
. Application of an Eulerian-Lagrangian-Agent method (ELAM) to rank alternative designs of a juvenile fish passage facility. J. Hydroinformatics [Internet]. 2006 ;8:271-295. Available from: http://dx.doi.org/10.2166/hydro.2006.006
. Correcting Bias in Survival Estimation Resulting From Tag Failure in Acoustic and Radiotelemetry Studies. Journal of Agricultural, Biological, and Environmental Statistics [Internet]. 2006 ;11:183-196. Available from: http://dx.doi.org/10.1198/108571106X111323
. Effects of Water Temperature and Flow on Adult Salmon Migration Swim Speed and Delay. Transactions of the American Fisheries Society [Internet]. 2006 ;135:188-199. Available from: http://dx.doi.org/10.1577/T04-181.1
. Estimating the Effects of Smolt Transportation from Different Vantage Points and Management Perspectives. North American Journal of Fisheries Management [Internet]. 2006 ;26:460-472. Available from: http://dx.doi.org/10.1577/M05-080.1
. Evaluation and Recommendations on Alternative Hydroacoustic Array Deployments for the Mouth of the Columbia River to Provide Estimates of Salmonid Smolt Survival and Movements. Design and Analysis of Salmonid Tagging Studies in the Columbia Basin [Internet]. 2006 ;XX. Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=00025091-1
. Evaluation of the 2004 Predictions of Run-size and Passage Distributions of Adult Chinook Salmon (Oncorhynchus tschawytscha) returning to the Columbia and Snake Rivers. [Internet]. 2006 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=00020638-2
. Evaluation of the 2004 Predictions of the Run-Timing of Wild Migrant Yearling Chinook, Subyearling Chinook and Steelhead and Water Quality at Multiple Locations on the Snake and Columbia Rivers using CRiSP/RealTime. [Internet]. 2006 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=00005396-2
. Evaluation of the 2005 Predictions of Run-size and Passage Distributions of Adult Chinook Salmon (Oncorhynchus tschawytscha) returning to the Columbia and Snake Rivers. [Internet]. 2006 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=00025162-3
. Evaluation of the 2005 Predictions of the Run-Timing of Wild and Hatchery-Reared Migrant Salmon and Steelhead Trout migrating to Lower Granite, Rock Island, McNary, John Day, and Bonneville Dams using Program RealTime. Monitoring and Evaluation of Smolt Migration in the Columbia Basin [Internet]. 2006 ;XIII. Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=00013690-5
. Evaluation of the 2005 Predictions of the Run-Timing of Wild Migrant Yearling Chinook, Subyearling Chinook and Steelhead and Water Quality at Multiple Locations on the Snake and Columbia Rivers using CRiSP/RealTime. [Internet]. 2006 . Available from: sites/default/files/papers/PO.2005.pdf
. Forecasting 3-D fish movement behavior using a Eulerian-Lagrangian-agent method (ELAM). Ecological Modelling [Internet]. 2006 ;192:197-223. Available from: http://dx.doi.org/10.1016/j.ecolmodel.2005.08.004
Historical population structure of Central Valley steelhead and its alteration by dams. San Francisco Estuary and Watershed Science [Internet]. 2006 ;4. Available from: http://escholarship.org/uc/item/1ss794fc
. Learning and animal behavior: exploring the dynamics of simple models. [Internet]. 2006 . Available from: sites/default/files/papers/steele-feldman_thesis.pdf
. Preliminary analysis of hydroacoustically tagged salmon smolt survival and migration rates in the mid-Columbia River. [Internet]. 2006 . Available from: sites/default/files/papers/HTIanalysis_Gurarie2006.pdf
Salmon Insider Columbia Basin Research Newsletter Autumn 2006. [Internet]. 2006 . Available from: sites/default/files/newsletter/newsletter_2006n4autumn.pdf
Salmon Insider Columbia Basin Research Newsletter Spring 2006. [Internet]. 2006 . Available from: sites/default/files/newsletter/newsletter_2006n2spring.pdf
Salmon Insider Columbia Basin Research Newsletter Summer 2006. [Internet]. 2006 . Available from: sites/default/files/newsletter/newsletter_2006n3summer.pdf
Salmon Insider Columbia Basin Research Newsletter Winter 2006. [Internet]. 2006 . Available from: sites/default/files/newsletter/newsletter_2006n1winter.pdf
. A Summary of Methods for Conducting Salmonid Fry Mark-Recapture Studies for Estimating Survival in Tributaries. Design and Analysis of Salmonid Tagging Studies in the Columbia Basin [Internet]. 2006 ;XXI. Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=00025091-2
. Calculating the variance of the finite rate of population change from a matrix model in Mathematica. Special section: Advanced Technology for Environmental Modelling [Internet]. 2007 ;22(3):359 - 364. Available from: https://www.sciencedirect.com/science/article/pii/S1364815206000028
. Characteristics of annual water temperature profiles in snowmelt-influenced and rain-dominated watersheds. [Internet]. 2007 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P102771
. Evaluation of the 2006 Predictions of Run-size and Passage Distributions of Adult Chinook Salmon [Oncorhynchus tschawytscha] Returning to the Columbia and Snake Rivers. [Internet]. 2007 . Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=P102789
. Evaluation of the 2006 Predictions of the Run-Timing of Wild and Hatchery-Reared Salmon and Steelhead Smolt at Rock Island, Lower Granite, McNary, John Day and Bonneville Dams using Program Real Time. Monitoring and Evaluation of Smolt Migration in the Columbia Basin [Internet]. 2007 ;XIV. Available from: http://pisces.bpa.gov/release/documents/documentviewer.aspx?doc=00025093-2