Weber LJ, Goodwin RA, Li S, Nestler JM, Anderson JJ. Application of an Eulerian-Lagrangian-Agent method (ELAM) to rank alternative designs of a juvenile fish passage facility. J. Hydroinformatics [Internet]. 2006 ;8:271-295. Available from: http://dx.doi.org/10.2166/hydro.2006.006

Perry RW, Buchanan RA, Brandes PL, Burau J, Israel JA. Anadromous salmonids in the delta: new science 2006–2016. San Francisco Estuary and Watershed Science [Internet]. 2016 ;14(2). Available from: https://escholarship.org/uc/item/27f0s5kh

Anderson JJ. An agent-based event driven foraging model. Natural Resource Modeling [Internet]. 2002 ;15:55-82. Available from: http://dx.doi.org/10.1111/j.1939-7445.2002.tb00080.x

Goodwin RA, Anderson JJ, Nestler JM, Liong S-Y, Phoon K-K, Babovic V. Decoding 3-D movement patterns of fish in response to hydrodynamics and water quality for forecast simulation. Hydroinformatics [Internet]. 2004 ;1:254-261. Available from: http://dx.doi.org/10.1142/9789812702838_0031

Anderson JJ, Emmett RL, Schiewe MH. Decadal Scale Climate Pattern and Salmon Survival: Indicators, Interactions and Implications. Estuarine and Ocean Survival of Northeastern Pacific Salmon [Internet]. 1996 . Available from: sites/default/files/papers/anderson/newport.pdf

Anderson JJ. Characterizing System Failure Curves with Vitality. Army Science Conference, 26th [Internet]. 2008 . Available from: sites/default/files/papers/anderson/2008_army26thscienceconf.pdf

Anderson JJ, Marmorek DR. Review of the Influence of Climate on Salmon. In: Plan for Analyzing and Testing Hypotheses (PATH): Final report on retrospective analyses for fiscal year 1996. Plan for Analyzing and Testing Hypotheses (PATH): Final report on retrospective analyses for fiscal year 1996. Vancouver, B.C.: ESSA Technologies Ltd; 1996. Available from: sites/default/files/papers/anderson/climate.pdf

Nestler JM, Goodwin RA, Smith DL, Anderson JJ. Mathematical & Conceptual Framework for the New Discipline of Ecohydraulics. In: Wood P, Hannah D, Sadler J Hydroecology and Ecohydrology: Past, Present and Future. Hydroecology and Ecohydrology: Past, Present and Future. New York: Wiley; 2008. pp. 205-224.

Hinrichsen RA, Anderson JJ, Matthews GM, Ebbesmeyer CC. Effects of the ocean and river environments on the survival of Snake River stream-type chinook salmon. In: Marmorek DR, Peters CN, Parnell I Plan for Analyzing and Testing Hypotheses (PATH): Retrospective and prospective analyses of spring/summer chinook reviewed in fiscal year 1997. Plan for Analyzing and Testing Hypotheses (PATH): Retrospective and prospective analyses of spring/summer chinook reviewed in fiscal year 1997. Vancouver, B.C.: ESSA Technologies Ltd; 1997. Available from: sites/default/files/papers/effectsofocean.pdf

Salinger DH, Rockafellar RT. Dynamic splitting: An algorithm for deterministic and stochastic multiperiod optimization. In: Higle JL, Römisch W Stochastic Programming E-Print Series. Stochastic Programming E-Print Series. Humboldt-Universit?t zu Berlin, Institut für Mathematik; 2003. Available from: http://nbn-resolving.de/urn:nbn:de:kobv:11-10058960

Norris JG, Knudsen EE. Defining equivalent exploitation rate reduction policies for endangered salmon stocks. In: Sustainable Fisheries Management: Pacific Salmon. Sustainable Fisheries Management: Pacific Salmon. New York: CRC Press LLC; 2000. pp. 451-466.

Anderson JJ, Knudsen EE. Decadal climate cycles and declining Columbia River salmon. In: Sustainable Fisheries Management: Pacific Salmon. Sustainable Fisheries Management: Pacific Salmon. New York: CRC Press LLC; 2000. pp. 467-484. Available from: sites/default/files/papers/anderson/victoria.pdf

Anon. Sustainable Water and Environmental Management in the California Bay-Delta. The National Academies Press; 2012 p. 280. Available from: http://www.nap.edu/openbook.php?record_id=13394

Duarte A, Whitlock SL, Peterson JT. Encyclopedia of EcologySpecies Distribution Modeling. Elsevier; 2019 pp. 189 - 198. Available from: https://linkinghub.elsevier.com/retrieve/pii/B978012409548910572X